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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100835059   psbP domain-containing protein 1, chloroplastic 
 osa-u.5   4342913   psbP domain-containing protein 1, chloroplastic 
 osa-u.5   4352538   psbP domain-containing protein 1, chloroplastic 
 zma-u.5   100280179   PsbP domain-containing protein 1 chloroplastic 
 ath-u.5   PPD1   Photosystem II reaction center PsbP family protein 
 gma-u.5   100792664   psbP domain-containing protein 1, chloroplastic 
 sly-u.5   101264980   psbP domain-containing protein 1, chloroplastic 
 vvi-u.5   100259632   psbP domain-containing protein 1, chloroplastic 
 ppo-u.5   18098559   psbP domain-containing protein 1, chloroplastic 
 ppo-u.5   7478888   psbP domain-containing protein 1, chloroplastic 
 mtr-u.5   25499636   psbP domain-containing protein 1, chloroplastic 

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Top 50 coexpressed genes to 100835059 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100835059 (bdi-r.1 coexpression data)

CoexMap"100835059"


bdiLOC100835059 | Entrez gene ID : 100835059      
Species bdi osa zma ath gma sly vvi ppo mtr cre ghi cit hvu sot bra sbi tae nta bna
Paralog 1 2 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (82 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (19 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (25 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (47 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (267 genes)  IEA  
Protein XP_003579193.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_003579193.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003579193.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100835059

.
osa-u.5
for
4342913

.
osa-u.5
for
4352538

.
zma-u.5
for
100280179

.
ath-u.5
for
PPD1

.
gma-u.5
for
100792664

.
sly-u.5
for
101264980

.
vvi-u.5
for
100259632

.
ppo-u.5
for
18098559

.
ppo-u.5
for
7478888

.
mtr-u.5
for
25499636

.


Ortholog ID: 8083
Species ath gma sly osa osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PPD1 LOC100792664 LOC101264980 LOC4352538 LOC4342913 LOC100280179 LOC103870840 LOC103833512 LOC100259632 LOC7478888 LOC18098559 LOC25499636 LOC123110752 LOC123102561 LOC123451876 LOC107893297 LOC107888349 LOC106360633 LOC106380629 CHLRE_08g362900v5 LOC8068853 LOC102584851 LOC102607332 LOC100835059 LOC107791372 LOC107795331
Function* Photosystem II reaction center PsbP family protein psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic PsbP domain-containing protein 1 chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic uncharacterized protein psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic psbP domain-containing protein 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 11
ath01240 Biosynthesis of cofactors 5
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03060 Protein export 2
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 11
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827223 100792664 101264980 4352538 4342913 100280179 103870840 103833512 100259632 7478888 18098559 25499636 123110752 123102561 123451876 107893297 107888349 106360633 106380629 5721608 8068853 102584851 102607332 100835059 107791372 107795331
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