ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100836843	uncharacterized LOC100836843
bdi-r.1	100832583	transmembrane protein 64
tae-r.2	123093776	TVP38/TMEM64 family membrane protein slr0305
tae-r.2	123052723	uncharacterized LOC123052723
hvu-r.1	123403707	uncharacterized membrane protein At4g09580-like
hvu-r.1	123449887	TVP38/TMEM64 family membrane protein slr0305-like
osa-u.5	4343179	uncharacterized LOC4343179
osa-u.5	4332948	uncharacterized LOC4332948
zma-u.5	103647660	TVP38/TMEM64 family membrane protein YtxB
zma-u.5	100272380	SNARE associated Golgi protein family
zma-u.5	100276030	SNARE associated Golgi protein family
sbi-r.1	8079377	transmembrane protein 64
sbi-r.1	8077269	uncharacterized LOC8077269
sbi-r.1	8080488	transmembrane protein 64
ath-u.5	AT2G02370	SNARE associated Golgi protein family
ath-u.5	AT4G12000	SNARE associated Golgi protein family
ath-u.5	AT4G22850	SNARE associated Golgi protein family
gma-u.5	100808455	transmembrane protein 64
gma-u.5	100803521	TVP38/TMEM64 family membrane protein YdjX
gma-u.5	100800730	transmembrane protein 64
sly-u.5	101246475	uncharacterized LOC101246475
sly-u.5	101259866	uncharacterized LOC101259866
bra-r.6	103839912	TVP38/TMEM64 family membrane protein slr0305
bra-r.6	103872002	transmembrane protein 64
bra-r.6	103860389	uncharacterized LOC103860389
vvi-u.5	100258130	uncharacterized LOC100258130
vvi-u.5	100246677	uncharacterized LOC100246677
ppo-u.5	18097082	uncharacterized LOC18097082
ppo-u.5	7458206	uncharacterized LOC7458206
ppo-u.5	7477793	uncharacterized LOC7477793
mtr-u.5	11406469	uncharacterized protein HI_0703
mtr-u.5	11406383	transmembrane protein 64
ghi-r.1	107926991	transmembrane protein 64
ghi-r.1	107963695	TVP38/TMEM64 family membrane protein slr0305
bna-r.1	111216252	transmembrane protein 64
bna-r.1	125591701	transmembrane protein 64-like
bna-r.1	106382389	transmembrane protein 64
sot-r.1	102603018	transmembrane protein 64
sot-r.1	102597255	uncharacterized LOC102597255
cit-r.1	102626162	uncharacterized LOC102626162
cit-r.1	102617193	uncharacterized LOC102617193
nta-r.1	107786579	uncharacterized LOC107786579
nta-r.1	107792903	uncharacterized LOC107792903
nta-r.1	107785111	uncharacterized LOC107785111
cre-r.1	CHLRE_02g088350v5	uncharacterized protein

Top 50 coexpressed genes to 100836843 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100836843 (bdi-r.1 coexpression data)

CoexMap"100836843"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003563151.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, golg 2, vacu 1

(predict for XP_003563151.1)

Subcellular
localization
TargetP

other 9

(predict for XP_003563151.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100836843	bdi-r.1 for 100832583	tae-r.2 for 123093776	tae-r.2 for 123052723	hvu-r.1 for 123403707	hvu-r.1 for 123449887	osa-u.5 for 4343179	osa-u.5 for 4332948	zma-u.5 for 103647660	zma-u.5 for 100272380	zma-u.5 for 100276030	sbi-r.1 for 8079377	sbi-r.1 for 8077269	sbi-r.1 for 8080488	ath-u.5 for AT2G02370	ath-u.5 for AT4G12000	ath-u.5 for AT4G22850	gma-u.5 for 100808455	gma-u.5 for 100803521	gma-u.5 for 100800730	sly-u.5 for 101246475	sly-u.5 for 101259866	bra-r.6 for 103839912	bra-r.6 for 103872002	bra-r.6 for 103860389	vvi-u.5 for 100258130	vvi-u.5 for 100246677	ppo-u.5 for 18097082	ppo-u.5 for 7458206	ppo-u.5 for 7477793	mtr-u.5 for 11406469	mtr-u.5 for 11406383	ghi-r.1 for 107926991	ghi-r.1 for 107963695	bna-r.1 for 111216252	bna-r.1 for 125591701	bna-r.1 for 106382389	sot-r.1 for 102603018	sot-r.1 for 102597255	cit-r.1 for 102626162	cit-r.1 for 102617193	nta-r.1 for 107786579	nta-r.1 for 107792903	nta-r.1 for 107785111	cre-r.1 for CHLRE_02g088350v5

Ortholog

Ortholog ID: 977

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100836843

transmembrane protein 64

TVP38/TMEM64 family membrane protein slr0305

TVP38/TMEM64 family membrane protein slr0305-like

uncharacterized LOC123425971

uncharacterized LOC4343179

uncharacterized LOC4332948

TVP38/TMEM64 family membrane protein YtxB

SNARE associated Golgi protein family

transmembrane protein 64

uncharacterized LOC8077269

transmembrane protein 64

SNARE associated Golgi protein family

transmembrane protein 64

TVP38/TMEM64 family membrane protein YdjX

uncharacterized LOC101246475

uncharacterized LOC101259866

transmembrane protein 64

uncharacterized LOC100258130

uncharacterized LOC100246677

uncharacterized LOC100241548

uncharacterized LOC7458206

uncharacterized LOC7477793

uncharacterized LOC7490937

uncharacterized protein HI_0703

transmembrane protein 64

TVP38/TMEM64 family membrane protein slr0305

transmembrane protein 64

TVP38/TMEM64 family membrane protein slr0305

uncharacterized LOC106396190

transmembrane protein 64

uncharacterized LOC102597255

uncharacterized LOC102626162

uncharacterized LOC102617193

uncharacterized LOC107786579

uncharacterized LOC107792903

uncharacterized LOC107813419

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae00061	Fatty acid biosynthesis	2
tae00071	Fatty acid degradation	2
tae01212	Fatty acid metabolism	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00061	Fatty acid biosynthesis	2
tae01040	Biosynthesis of unsaturated fatty acids	2
tae01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00330	Arginine and proline metabolism	3
zma00410	beta-Alanine metabolism	3
zma00770	Pantothenate and CoA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma03008	Ribosome biogenesis in eukaryotes	2
zma04712	Circadian rhythm - plant	2
zma04016	MAPK signaling pathway - plant	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	6
gma01212	Fatty acid metabolism	5
gma01040	Biosynthesis of unsaturated fatty acids	4
gma00073	Cutin, suberine and wax biosynthesis	2
gma04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3
gma04120	Ubiquitin mediated proteolysis	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly04382	Cornified envelope formation	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00270	Cysteine and methionine metabolism	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3
mtr00860	Porphyrin metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00770	Pantothenate and CoA biosynthesis	2
ghi00966	Glucosinolate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	5
sot03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	4
cit04120	Ubiquitin mediated proteolysis	3
cit00710	Carbon fixation by Calvin cycle	3
cit01200	Carbon metabolism	3
cit00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	2
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	4
nta04148	Efferocytosis	2
nta00020	Citrate cycle (TCA cycle)	2

Expression

Expression pattern

Entrez Gene ID^*

100836843

100832583

123093776

123138909

123449887

123425971

4343179

4332948

103647660

100276030

100272748

8079377

8077269

8080488

814768

826807

837802

100808455

100794207

100788805

101246475

101259866

103872002

103843125

103836161

100258130

100246677

100241548

7458206

7477793

7490937

11406469

11406383

107963695

121219895

107929185

106367022

106396190

106445579

102603018

102597255

102626162

102617193

107786579

107792903

107813419

66052296

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	2	2	2	3	3	3	3	2	3	2	3	2	2	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100836843 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100836843 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**