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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100837361   pentatricopeptide repeat-containing protein At1g33350 
 tae-r.2   123071082   pentatricopeptide repeat-containing protein At1g33350 
 osa-u.5   4327956   pentatricopeptide repeat-containing protein At1g33350 
 sbi-r.1   8082398   pentatricopeptide repeat-containing protein At1g33350 
 vvi-u.5   100267935   pentatricopeptide repeat-containing protein At5g66520 
 mtr-u.5   11432546   pentatricopeptide repeat-containing protein At2g22070 
 ghi-r.1   107939524   pentatricopeptide repeat-containing protein At5g66520 
 ghi-r.1   121218599   pentatricopeptide repeat-containing protein At5g66520 
 sot-r.1   102583717   pentatricopeptide repeat-containing protein At5g66520-like 
 cit-r.1   102612926   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107759855   pentatricopeptide repeat-containing protein ELI1, chloroplastic-like 

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Top 50 coexpressed genes to 100837361 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100837361 (bdi-r.1 coexpression data)

CoexMap"100837361"


bdiLOC100837361 | Entrez gene ID : 100837361      
Species bdi tae osa sbi vvi mtr ghi sot cit nta gma zma bra cre ppo sly ath bna hvu
Paralog 1 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003564406.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 2,  plas 1,  pero 1,  E.R._vacu 1  (predict for XP_003564406.1)
Subcellular
localization
TargetP
other 3  (predict for XP_003564406.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100837361
tae-r.2
for
123071082
osa-u.5
for
4327956
sbi-r.1
for
8082398
vvi-u.5
for
100267935
mtr-u.5
for
11432546
ghi-r.1
for
107939524
ghi-r.1
for
121218599
sot-r.1
for
102583717
cit-r.1
for
102612926
nta-r.1
for
107759855


Ortholog ID: 13297
Species bdi tae osa sbi vvi mtr ghi ghi sot cit nta
Symbol LOC100837361 LOC123071082 LOC4327956 LOC8082398 LOC100267935 LOC11432546 LOC107939524 LOC121218599 LOC102583717 LOC102612926 LOC107759855
Function* pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At1g33350 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At2g22070 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein ELI1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi01200 Carbon metabolism 5
bdi00260 Glycine, serine and threonine metabolism 3
bdi00270 Cysteine and methionine metabolism 3
bdi00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100837361 123071082 4327956 8082398 100267935 11432546 107939524 121218599 102583717 102612926 107759855
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