ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100838573	uncharacterized LOC100838573
bdi-r.1	100838777	uncharacterized LOC100838777
bdi-r.1	100821286	uncharacterized LOC100821286
tae-r.2	123065135	uncharacterized LOC123065135
tae-r.2	123058084	uncharacterized LOC123058084
tae-r.2	123167044	uncharacterized LOC123167044
hvu-r.1	123439611	uncharacterized LOC123439611
hvu-r.1	123409927	uncharacterized LOC123409927
osa-u.5	4327339	uncharacterized LOC4327339
osa-u.5	4341279	uncharacterized LOC4341279
zma-u.5	100276905	uncharacterized LOC100276905
zma-u.5	111589984	uncharacterized LOC111589984
zma-u.5	100275498	uncharacterized LOC100275498
sbi-r.1	8061959	uncharacterized LOC8061959
sbi-r.1	8084334	uncharacterized LOC8084334
sbi-r.1	8065921	uncharacterized LOC8065921
ath-u.5	AT3G16330	Avr9/Cf-9 rapidly elicited protein
ath-u.5	AT4G29110	cotton fiber protein
ath-u.5	AT1G52140	Avr9/Cf-9 rapidly elicited protein
gma-u.5	100802625	uncharacterized LOC100802625
gma-u.5	100801941	uncharacterized LOC100801941
gma-u.5	100802495	uncharacterized LOC100802495
sly-u.5	101253695	uncharacterized LOC101253695
sly-u.5	101257239	uncharacterized LOC101257239
sly-u.5	101247111	uncharacterized LOC101247111
bra-r.6	103869832	uncharacterized LOC103869832
bra-r.6	103861871	uncharacterized LOC103861871
bra-r.6	103847600	uncharacterized LOC103847600
vvi-u.5	100266427	uncharacterized LOC100266427
vvi-u.5	100248099	uncharacterized LOC100248099
ppo-u.5	18094781	uncharacterized LOC18094781
ppo-u.5	7461556	uncharacterized LOC7461556
ppo-u.5	7462293	uncharacterized LOC7462293
mtr-u.5	11420970	uncharacterized LOC11420970
mtr-u.5	11412375	uncharacterized LOC11412375
mtr-u.5	11420694	uncharacterized LOC11420694
ghi-r.1	107951914	uncharacterized LOC107951914
ghi-r.1	107897344	uncharacterized LOC107897344
ghi-r.1	107906136	uncharacterized LOC107906136
bna-r.1	106454985	uncharacterized LOC106454985
sot-r.1	102580149	uncharacterized LOC102580149
sot-r.1	102597263	uncharacterized LOC102597263
sot-r.1	102601632	uncharacterized LOC102601632
cit-r.1	102627839	hypothetical protein
cit-r.1	102612263	hypothetical protein
cit-r.1	102607482	hypothetical protein
nta-r.1	107829904	uncharacterized LOC107829904
nta-r.1	107761374	uncharacterized LOC107761374
nta-r.1	107761375	uncharacterized LOC107761375

Top 50 coexpressed genes to 100838573 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100838573 (bdi-r.1 coexpression data)

CoexMap"100838573"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003565463.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 3, mito 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_003565463.2)

Subcellular
localization
TargetP

other 9

(predict for XP_003565463.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100838573	bdi-r.1 for 100838777	bdi-r.1 for 100821286	tae-r.2 for 123065135	tae-r.2 for 123058084	tae-r.2 for 123167044	hvu-r.1 for 123439611	hvu-r.1 for 123409927	osa-u.5 for 4327339	osa-u.5 for 4341279	zma-u.5 for 100276905	zma-u.5 for 111589984	zma-u.5 for 100275498	sbi-r.1 for 8061959	sbi-r.1 for 8084334	sbi-r.1 for 8065921	ath-u.5 for AT3G16330	ath-u.5 for AT4G29110	ath-u.5 for AT1G52140	gma-u.5 for 100802625	gma-u.5 for 100801941	gma-u.5 for 100802495	sly-u.5 for 101253695	sly-u.5 for 101257239	sly-u.5 for 101247111	bra-r.6 for 103869832	bra-r.6 for 103861871	bra-r.6 for 103847600	vvi-u.5 for 100266427	vvi-u.5 for 100248099	ppo-u.5 for 18094781	ppo-u.5 for 7461556	ppo-u.5 for 7462293	mtr-u.5 for 11420970	mtr-u.5 for 11412375	mtr-u.5 for 11420694	ghi-r.1 for 107951914	ghi-r.1 for 107897344	ghi-r.1 for 107906136	bna-r.1 for 106454985	sot-r.1 for 102580149	sot-r.1 for 102597263	sot-r.1 for 102601632	cit-r.1 for 102627839	cit-r.1 for 102612263	cit-r.1 for 102607482	nta-r.1 for 107829904	nta-r.1 for 107761374	nta-r.1 for 107761375

Ortholog

Ortholog ID: 655

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100838573

uncharacterized LOC100838777

uncharacterized LOC100821286

uncharacterized LOC123065135

uncharacterized LOC123089424

uncharacterized LOC123439611

uncharacterized LOC123409927

uncharacterized LOC4327339

uncharacterized LOC4341279

uncharacterized LOC100276905

uncharacterized LOC111589984

uncharacterized LOC100275498

uncharacterized LOC8061959

uncharacterized LOC8084334

uncharacterized LOC8065921

Avr9/Cf-9 rapidly elicited protein

cotton fiber protein

Avr9/Cf-9 rapidly elicited protein

uncharacterized LOC100802625

uncharacterized LOC100780921

uncharacterized LOC100786760

uncharacterized LOC101257239

uncharacterized LOC101253388

uncharacterized LOC103869832

uncharacterized LOC103861871

uncharacterized LOC103868517

uncharacterized LOC100266427

uncharacterized LOC100248099

uncharacterized LOC7461556

uncharacterized LOC7462293

uncharacterized LOC7463780

uncharacterized LOC11420970

uncharacterized LOC11420694

uncharacterized LOC11422002

uncharacterized LOC107897344

uncharacterized LOC107950621

uncharacterized LOC121208613

uncharacterized LOC106364217

uncharacterized LOC102597903

uncharacterized LOC102601293

uncharacterized LOC102602300

hypothetical protein

uncharacterized LOC107809291

uncharacterized LOC107809290

uncharacterized LOC107791111

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	3
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	6
vvi04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	3
cit00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00270	Cysteine and methionine metabolism	2
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2
nta00270	Cysteine and methionine metabolism	2
nta04016	MAPK signaling pathway - plant	2

Expression

Expression pattern

Entrez Gene ID^*

100838573

100838777

100821286

123065135

123089424

123439611

123409927

4327339

4341279

100276905

111589984

100275498

8061959

8084334

8065921

820880

829032

841644

100802625

100780921

100786760

101257239

101253388

103869832

103861871

103868517

100266427

100248099

7461556

7462293

7463780

11420970

11420694

11422002

107897344

107950621

121208613

106364217

102597903

102601293

102602300

102627839

102612263

102607482

107809291

107809290

107791111

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	2	2	3	3	3	3	3	3	2	3	3	3	1	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100838573 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100838573 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**