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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100839584   translocon-associated protein subunit alpha 
 tae-r.2   123160146   translocon-associated protein subunit alpha 
 tae-r.2   123148287   translocon-associated protein subunit alpha 
 tae-r.2   123170032   translocon-associated protein subunit alpha 
 hvu-r.1   123407264   translocon-associated protein subunit alpha 
 osa-u.5   4342072   translocon-associated protein subunit alpha 
 zma-u.5   100273641   translocon-associated protein alpha subunit 
 zma-u.5   100193254   uncharacterized LOC100193254 
 sbi-r.1   8069194   translocon-associated protein subunit alpha 
 ath-u.5   AT2G16595   Translocon-associated protein (TRAP), alpha subunit 
 ath-u.5   AT2G21160   Translocon-associated protein (TRAP), alpha subunit 
 gma-u.5   100820543   translocon-associated protein subunit alpha-like 
 gma-u.5   100777232   translocon-associated protein subunit alpha 
 sly-u.5   101256722   translocon-associated protein subunit alpha 
 sly-u.5   101253329   translocon-associated protein subunit alpha 
 bra-r.6   103846035   translocon-associated protein subunit alpha 
 bra-r.6   103842553   translocon-associated protein subunit alpha 
 bra-r.6   103864251   translocon-associated protein subunit alpha 
 vvi-u.5   100250330   translocon-associated protein subunit alpha 
 ppo-u.5   7477863   translocon-associated protein subunit alpha 
 ppo-u.5   7494266   translocon-associated protein subunit alpha 
 mtr-u.5   11421535   translocon-associated protein subunit alpha 
 mtr-u.5   11443646   translocon-associated protein subunit alpha 
 ghi-r.1   107947403   translocon-associated protein subunit alpha 
 ghi-r.1   107939135   translocon-associated protein subunit alpha 
 ghi-r.1   107927996   translocon-associated protein subunit alpha 
 bna-r.1   125607975   translocon-associated protein subunit alpha-like 
 bna-r.1   106368809   translocon-associated protein subunit alpha-like 
 bna-r.1   106391888   translocon-associated protein subunit alpha-like 
 sot-r.1   102584880   translocon-associated protein subunit alpha-like 
 sot-r.1   102601148   translocon-associated protein subunit alpha-like 
 cit-r.1   102618850   translocon-associated protein subunit alpha 
 nta-r.1   107780285   translocon-associated protein subunit alpha 
 nta-r.1   107792694   translocon-associated protein subunit alpha 
 nta-r.1   107807630   translocon-associated protein subunit alpha 
 cre-r.1   CHLRE_17g741000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100839584 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100839584 (bdi-r.1 coexpression data)

CoexMap"100839584"


bdiLOC100839584 | Entrez gene ID : 100839584      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 2 2 2 3 1 2 2 3 3 2 1 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04141 [list] [network] Protein processing in endoplasmic reticulum (196 genes)
GO BP
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (204 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (470 genes)  IEA  
GO MF
Protein XP_003563573.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 1,  mito 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_003563573.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_003563573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100839584
tae-r.2
for
123160146
tae-r.2
for
123148287
tae-r.2
for
123170032
hvu-r.1
for
123407264
osa-u.5
for
4342072
zma-u.5
for
100273641
zma-u.5
for
100193254
sbi-r.1
for
8069194
ath-u.5
for
AT2G16595
ath-u.5
for
AT2G21160
gma-u.5
for
100820543
gma-u.5
for
100777232
sly-u.5
for
101256722
sly-u.5
for
101253329
bra-r.6
for
103846035
bra-r.6
for
103842553
bra-r.6
for
103864251
vvi-u.5
for
100250330
ppo-u.5
for
7477863
ppo-u.5
for
7494266
mtr-u.5
for
11421535
mtr-u.5
for
11443646
ghi-r.1
for
107947403
ghi-r.1
for
107939135
ghi-r.1
for
107927996
bna-r.1
for
125607975
bna-r.1
for
106368809
bna-r.1
for
106391888
sot-r.1
for
102584880
sot-r.1
for
102601148
cit-r.1
for
102618850
nta-r.1
for
107780285
nta-r.1
for
107792694
nta-r.1
for
107807630
cre-r.1
for
CHLRE_17g741000v5


Ortholog ID: 4036
Species bdi tae tae tae hvu osa zma zma sbi ath ath gma gma sly sly bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC100839584 LOC123160146 LOC123148287 LOC123170032 LOC123407264 LOC4342072 LOC100273641 LOC100193254 LOC8069194 AT2G16595 AT2G21160 LOC100820543 LOC100777232 LOC101256722 LOC101253329 LOC103846035 LOC103842553 LOC103864251 LOC100250330 LOC7477863 LOC7494266 LOC11421535 LOC11443646 LOC107921184 LOC107908670 LOC107949083 LOC125607975 LOC106415633 LOC106420739 LOC102584880 LOC102601148 LOC102618850 LOC107792694 LOC107807630 LOC107769724 CHLRE_17g741000v5
Function* translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein alpha subunit uncharacterized LOC100193254 translocon-associated protein subunit alpha Translocon-associated protein (TRAP), alpha subunit Translocon-associated protein (TRAP), alpha subunit translocon-associated protein subunit alpha-like translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha-like translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha-like translocon-associated protein subunit alpha-like translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha translocon-associated protein subunit alpha uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 11
bdi03060 Protein export 4
bdi00510 N-Glycan biosynthesis 4
bdi00513 Various types of N-glycan biosynthesis 4
bdi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 7
hvu03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa03060 Protein export 3
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
sbi03050 Proteasome 4
sbi03060 Protein export 2
sbi04145 Phagosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 9
ath00510 N-Glycan biosynthesis 6
ath00513 Various types of N-glycan biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 8
gma03060 Protein export 5
gma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 12
gma04145 Phagosome 7
gma03060 Protein export 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 11
sly00510 N-Glycan biosynthesis 8
sly00513 Various types of N-glycan biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 7
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly00190 Oxidative phosphorylation 2
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 11
bra03060 Protein export 6
bra04145 Phagosome 6
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi04141 Protein processing in endoplasmic reticulum 5
vvi00510 N-Glycan biosynthesis 4
vvi00513 Various types of N-glycan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 11
ppo04145 Phagosome 3
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 14
ppo04145 Phagosome 2
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 6
mtr04144 Endocytosis 2
mtr00510 N-Glycan biosynthesis 2
mtr00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 11
mtr03060 Protein export 3
mtr04145 Phagosome 3
mtr00510 N-Glycan biosynthesis 2
mtr00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 10
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 8
ghi00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 9
ghi03010 Ribosome 8
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 9
sot03060 Protein export 4
sot04145 Phagosome 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 6
sot03060 Protein export 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit03060 Protein export 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 8
nta03060 Protein export 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta03060 Protein export 4
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 8
nta03060 Protein export 2
nta04145 Phagosome 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 6
cre03060 Protein export 3
cre04145 Phagosome 3
cre00520 Amino sugar and nucleotide sugar metabolism 2
cre01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100839584 123160146 123148287 123170032 123407264 4342072 100273641 100193254 8069194 816160 816651 100820543 100777232 101256722 101253329 103846035 103842553 103864251 100250330 7477863 7494266 11421535 11443646 107921184 107908670 107949083 125607975 106415633 106420739 102584880 102601148 102618850 107792694 107807630 107769724 5726651
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