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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100840001   transcription factor bHLH68 
 bdi-r.1   100821716   transcription factor bHLH133 
 tae-r.2   123116472   transcription factor bHLH133 
 tae-r.2   123060799   transcription factor bHLH68 
 tae-r.2   123042128   transcription factor bHLH68 
 hvu-r.1   123427916   transcription factor bHLH68-like 
 hvu-r.1   123412068   transcription factor bHLH68-like 
 hvu-r.1   123443260   transcription factor bHLH68-like 
 osa-u.5   4325885   transcription factor bHLH68 
 osa-u.5   4329008   transcription factor bHLH133 
 osa-u.5   4338155   transcription factor bHLH68 
 zma-u.5   100274340   uncharacterized LOC100274340 
 zma-u.5   100216872   uncharacterized LOC100216872 
 zma-u.5   100191589   uncharacterized LOC100191589 
 sbi-r.1   8066635   transcription factor bHLH68 
 sbi-r.1   8155296   transcription factor bHLH68 
 sbi-r.1   8060380   transcription factor bHLH68 
 ath-u.5   AT2G20100   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT4G29100   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100777095   transcription factor bHLH68-like 
 gma-u.5   100785156   transcription factor bHLH68 
 gma-u.5   100786555   transcription factor bHLH68-like 
 sly-u.5   101251487   transcription factor bHLH68 
 sly-u.5   101267690   transcription factor bHLH68 
 sly-u.5   101250810   transcription factor bHLH68 
 bra-r.6   103861870   transcription factor bHLH68 
 bra-r.6   103853832   transcription factor bHLH68 
 bra-r.6   103842612   transcription factor bHLH133 
 vvi-u.5   100249096   transcription factor bHLH68 
 vvi-u.5   100248013   transcription factor bHLH68 
 ppo-u.5   7483537   transcription factor bHLH68 
 ppo-u.5   7475081   transcription factor bHLH68 
 ppo-u.5   7488103   transcription factor bHLH68 
 mtr-u.5   11425782   transcription factor bHLH68 
 mtr-u.5   25497378   transcription factor bHLH68 
 mtr-u.5   25502267   transcription factor bHLH68 
 ghi-r.1   107913898   transcription factor bHLH68 
 ghi-r.1   107930868   transcription factor bHLH68 
 ghi-r.1   107906149   transcription factor bHLH68 
 bna-r.1   111200900   transcription factor bHLH133-like 
 bna-r.1   106368934   transcription factor bHLH133 
 bna-r.1   106358796   transcription factor bHLH68 
 sot-r.1   102605353   transcription factor bHLH68 
 sot-r.1   102604321   transcription factor bHLH68-like 
 sot-r.1   102594739   transcription factor bHLH68-like 
 cit-r.1   102621228   transcription factor bHLH68-like 
 cit-r.1   102627938   transcription factor bHLH68 
 nta-r.1   107762823   uncharacterized LOC107762823 
 nta-r.1   107783000   transcription factor bHLH68 
 nta-r.1   107793877   uncharacterized LOC107793877 

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Top 50 coexpressed genes to 100840001 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100840001 (bdi-r.1 coexpression data)

CoexMap"100840001"


bdiLOC100840001 | Entrez gene ID : 100840001      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 3 3 3 3 2 3 3 3 2 3 3 3 3 3 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (205 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (256 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (396 genes)  IEA  
Protein XP_003568722.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_003568722.1)
Subcellular
localization
TargetP
other 3,  chlo 3  (predict for XP_003568722.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100840001
bdi-r.1
for
100821716
tae-r.2
for
123116472
tae-r.2
for
123060799
tae-r.2
for
123042128
hvu-r.1
for
123427916
hvu-r.1
for
123412068
hvu-r.1
for
123443260
osa-u.5
for
4325885
osa-u.5
for
4329008
osa-u.5
for
4338155
zma-u.5
for
100274340
zma-u.5
for
100216872
zma-u.5
for
100191589
sbi-r.1
for
8066635
sbi-r.1
for
8155296
sbi-r.1
for
8060380
ath-u.5
for
AT2G20100
ath-u.5
for
AT4G29100
gma-u.5
for
100777095
gma-u.5
for
100785156
gma-u.5
for
100786555
sly-u.5
for
101251487
sly-u.5
for
101267690
sly-u.5
for
101250810
bra-r.6
for
103861870
bra-r.6
for
103853832
bra-r.6
for
103842612
vvi-u.5
for
100249096
vvi-u.5
for
100248013
ppo-u.5
for
7483537
ppo-u.5
for
7475081
ppo-u.5
for
7488103
mtr-u.5
for
11425782
mtr-u.5
for
25497378
mtr-u.5
for
25502267
ghi-r.1
for
107913898
ghi-r.1
for
107930868
ghi-r.1
for
107906149
bna-r.1
for
111200900
bna-r.1
for
106368934
bna-r.1
for
106358796
sot-r.1
for
102605353
sot-r.1
for
102604321
sot-r.1
for
102594739
cit-r.1
for
102621228
cit-r.1
for
102627938
nta-r.1
for
107762823
nta-r.1
for
107783000
nta-r.1
for
107793877


Ortholog ID: 1566
Species bdi bdi tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi sbi ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta
Symbol LOC100840001 LOC100821716 LOC123060799 LOC123042128 LOC123427916 LOC123412068 LOC123443260 LOC4325885 LOC4329008 LOC4338155 LOC100274340 LOC100216872 LOC100191589 LOC8066635 LOC8155296 LOC8060380 AT2G20100 AT4G29100 LOC100785156 LOC100802121 LOC100783401 LOC101251487 LOC101267690 LOC101250810 LOC103853832 LOC103842612 LOC103834727 LOC100249096 LOC100248013 LOC7483537 LOC7475081 LOC7488103 LOC11425782 LOC25497378 LOC25502267 LOC107933013 LOC107901255 LOC107897180 LOC106358796 LOC106383137 LOC106389794 LOC102605353 LOC102604321 LOC102594739 LOC102621228 LOC102627938 LOC107783000 LOC107790948 LOC107814525
Function* transcription factor bHLH68 transcription factor bHLH133 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68-like transcription factor bHLH68-like transcription factor bHLH68-like transcription factor bHLH68 transcription factor bHLH133 transcription factor bHLH68 uncharacterized LOC100274340 uncharacterized LOC100216872 uncharacterized LOC100191589 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH133 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68-like transcription factor bHLH68-like transcription factor bHLH68-like transcription factor bHLH68 transcription factor bHLH68 uncharacterized LOC107790948 transcription factor bHLH68
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae04075 Plant hormone signal transduction 2
tae00270 Cysteine and methionine metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100840001 100821716 123060799 123042128 123427916 123412068 123443260 4325885 4329008 4338155 100274340 100216872 100191589 8066635 8155296 8060380 816529 829031 100785156 100802121 100783401 101251487 101267690 101250810 103853832 103842612 103834727 100249096 100248013 7483537 7475081 7488103 11425782 25497378 25502267 107933013 107901255 107897180 106358796 106383137 106389794 102605353 102604321 102594739 102621228 102627938 107783000 107790948 107814525
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