ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100840097	uncharacterized LOC100840097
tae-r.2	123114515	uncharacterized LOC123114515
tae-r.2	123124012	uncharacterized LOC123124012
tae-r.2	123163191	uncharacterized LOC123163191
hvu-r.1	123395283	uncharacterized LOC123395283
osa-u.5	4343162	uncharacterized LOC4343162
zma-u.5	100276564	uncharacterized LOC100276564
sbi-r.1	8075741	uncharacterized LOC8075741
ath-u.5	AT5G13950	nuclear factor kappa-B-binding protein
gma-u.5	102660655	uncharacterized LOC102660655
gma-u.5	100776137	intracellular protein transport protein USO1
sly-u.5	101257819	uncharacterized LOC101257819
bra-r.6	103846526	uncharacterized LOC103846526
vvi-u.5	104881641	uncharacterized LOC104881641
ppo-u.5	18096541	uncharacterized LOC18096541
ppo-u.5	7461928	uncharacterized LOC7461928
mtr-u.5	25495896	uncharacterized LOC25495896
mtr-u.5	11439523	uncharacterized LOC11439523
ghi-r.1	107914180	uncharacterized LOC107914180
ghi-r.1	107897320	uncharacterized LOC107897320
ghi-r.1	107911749	uncharacterized LOC107911749
bna-r.1	106431203	uncharacterized LOC106431203
bna-r.1	106372252	uncharacterized LOC106372252
bna-r.1	125579032	uncharacterized LOC125579032
sot-r.1	102589927	uncharacterized LOC102589927
cit-r.1	102625405	uncharacterized LOC102625405
nta-r.1	107827579	uncharacterized LOC107827579
nta-r.1	107776830	uncharacterized LOC107776830

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0031011 [list] [network] Ino80 complex

(13 genes)

IEA

GO MF

Protein

XP_003563162.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 2, plas 1, cysk 1, cysk_plas 1

(predict for XP_003563162.2)

Subcellular
localization
TargetP

mito 7

(predict for XP_003563162.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100840097	tae-r.2 for 123114515	tae-r.2 for 123124012	tae-r.2 for 123163191	hvu-r.1 for 123395283	osa-u.5 for 4343162	zma-u.5 for 100276564	sbi-r.1 for 8075741	ath-u.5 for AT5G13950	gma-u.5 for 102660655	gma-u.5 for 100776137	sly-u.5 for 101257819	bra-r.6 for 103846526	vvi-u.5 for 104881641	ppo-u.5 for 18096541	ppo-u.5 for 7461928	mtr-u.5 for 25495896	mtr-u.5 for 11439523	ghi-r.1 for 107914180	ghi-r.1 for 107897320	ghi-r.1 for 107911749	bna-r.1 for 106431203	bna-r.1 for 106372252	bna-r.1 for 125579032	sot-r.1 for 102589927	cit-r.1 for 102625405	nta-r.1 for 107827579	nta-r.1 for 107776830

Ortholog

Ortholog ID: 7331

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100840097

uncharacterized LOC123114515

uncharacterized LOC123124012

uncharacterized LOC123163191

uncharacterized LOC123395283

uncharacterized LOC4343162

uncharacterized LOC100276564

uncharacterized LOC8075741

nuclear factor kappa-B-binding protein

uncharacterized LOC102660655

intracellular protein transport protein USO1

uncharacterized LOC101257819

uncharacterized LOC103846526

uncharacterized LOC104881641

uncharacterized LOC18096541

uncharacterized LOC7461928

uncharacterized LOC25495896

uncharacterized LOC11439523

uncharacterized LOC107914180

uncharacterized LOC107897320

uncharacterized LOC107911749

uncharacterized LOC106431203

uncharacterized LOC106372252

uncharacterized LOC125579032

uncharacterized LOC102589927

uncharacterized LOC102625405

uncharacterized LOC107827579

uncharacterized LOC107776830

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3
sbi03015	mRNA surveillance pathway	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	2
sly03040	Spliceosome	2
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2
ppo03013	Nucleocytoplasmic transport	2
ppo03040	Spliceosome	2
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

100840097

123114515

123124012

123163191

123395283

4343162

100276564

8075741

831243

102660655

100776137

101257819

103846526

104881641

18096541

7461928

25495896

11439523

107914180

107897320

107911749

106431203

106372252

125579032

102589927

102625405

107827579

107776830

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100840097 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840097 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	1	1	1	1	2	1	1	1	2	2	3	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100840097 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840097 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**