ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100840730	proactivator polypeptide-like 1
bdi-r.1	100826855	proactivator polypeptide-like 1
bdi-r.1	100830063	prosaposin
bdi-r.1	100827618	prosaposin
tae-r.2	123077317	proactivator polypeptide-like 1
tae-r.2	123096477	proactivator polypeptide-like 1
tae-r.2	123103174	prosaposin
hvu-r.1	123442834	proactivator polypeptide-like 1
hvu-r.1	123396456	prosaposin-like
hvu-r.1	123448055	proactivator polypeptide-like 1
osa-u.5	4327145	uncharacterized LOC4327145
osa-u.5	9267024	uncharacterized LOC9267024
osa-u.5	4349589	uncharacterized LOC4349589
zma-u.5	100283638	saposin-like type B, region 1 family protein
zma-u.5	100282519	surfactant protein B containing protein
zma-u.5	100282421	uncharacterized LOC100282421
sbi-r.1	8066948	proactivator polypeptide-like 1
sbi-r.1	110433828	prosaposin-like
sbi-r.1	8066766	proactivator polypeptide-like 1
ath-u.5	AT3G51730	saposin B domain-containing protein
ath-u.5	AT5G01800	saposin B domain-containing protein
gma-u.5	100812470	uncharacterized LOC100812470
gma-u.5	100802366	prosaposin
gma-u.5	100527899	saposin B domain-containing protein
sly-u.5	101253930	uncharacterized LOC101253930
sly-u.5	101266578	uncharacterized LOC101266578
bra-r.6	103860725	prosaposin
bra-r.6	103841113	prosaposin
vvi-u.5	100255017	uncharacterized LOC100255017
vvi-u.5	100248250	uncharacterized LOC100248250
ppo-u.5	7487357	uncharacterized LOC7487357
ppo-u.5	7482573	uncharacterized LOC7482573
mtr-u.5	11433621	prosaposin
ghi-r.1	107935966	prosaposin
ghi-r.1	107914554	prosaposin
ghi-r.1	107903579	prosaposin
bna-r.1	125596749	prosaposin-like
bna-r.1	106367673	prosaposin-like
bna-r.1	106367756	prosaposin-like
sot-r.1	102602502	prosaposin-like
sot-r.1	102600401	prosaposin-like
cit-r.1	102619717	uncharacterized LOC102619717
nta-r.1	107777346	uncharacterized LOC107777346
nta-r.1	107816607	uncharacterized LOC107816607
nta-r.1	107812754	uncharacterized LOC107812754

Top 50 coexpressed genes to 100840730 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100840730 (bdi-r.1 coexpression data)

CoexMap"100840730"

[Cytoscape]

Annotation

functional annotation

KEGG

bdi00600 [list] [network] Sphingolipid metabolism (40 genes)

bdi04142 [list] [network] Lysosome (71 genes)

GO BP

GO:0006665 [list] [network] sphingolipid metabolic process

(41 genes)

IEA

GO CC

GO:0005764 [list] [network] lysosome	(52 genes)	IEA
GO:0005615 [list] [network] extracellular space	(79 genes)	IEA

GO MF

Protein

XP_003569147.1 [sequence] [blastp]
XP_024314389.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 3, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1	(predict for XP_003569147.1)
mito 4, cyto_mito 3, cyto 2, plas 1, cyto_nucl 1	(predict for XP_024314389.1)

Subcellular
localization
TargetP

scret 7, mito 4	(predict for XP_003569147.1)
mito 2	(predict for XP_024314389.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100840730	bdi-r.1 for 100826855	bdi-r.1 for 100830063	bdi-r.1 for 100827618	tae-r.2 for 123077317	tae-r.2 for 123096477	tae-r.2 for 123103174	hvu-r.1 for 123442834	hvu-r.1 for 123396456	hvu-r.1 for 123448055	osa-u.5 for 4327145	osa-u.5 for 9267024	osa-u.5 for 4349589	zma-u.5 for 100283638	zma-u.5 for 100282519	zma-u.5 for 100282421	sbi-r.1 for 8066948	sbi-r.1 for 110433828	sbi-r.1 for 8066766	ath-u.5 for AT3G51730	ath-u.5 for AT5G01800	gma-u.5 for 100812470	gma-u.5 for 100802366	gma-u.5 for 100527899	sly-u.5 for 101253930	sly-u.5 for 101266578	bra-r.6 for 103860725	bra-r.6 for 103841113	vvi-u.5 for 100255017	vvi-u.5 for 100248250	ppo-u.5 for 7487357	ppo-u.5 for 7482573	mtr-u.5 for 11433621	ghi-r.1 for 107935966	ghi-r.1 for 107914554	ghi-r.1 for 107903579	bna-r.1 for 125596749	bna-r.1 for 106367673	bna-r.1 for 106367756	sot-r.1 for 102602502	sot-r.1 for 102600401	cit-r.1 for 102619717	nta-r.1 for 107777346	nta-r.1 for 107816607	nta-r.1 for 107812754

Ortholog

Ortholog ID: 1985

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

proactivator polypeptide-like 1

prosaposin

proactivator polypeptide-like 1

prosaposin-like

uncharacterized LOC9267024

uncharacterized LOC4349589

uncharacterized LOC100282421

uncharacterized LOC103641698

saposin B domain-containing protein

proactivator polypeptide-like 1

prosaposin-like

proactivator polypeptide-like 1

saposin B domain-containing protein

uncharacterized LOC100812470

prosaposin

saposin B domain-containing protein

uncharacterized LOC101253930

uncharacterized LOC101266578

prosaposin

uncharacterized LOC100255017

uncharacterized LOC100248250

uncharacterized LOC7487357

uncharacterized LOC7482573

prosaposin

prosaposin-like

uncharacterized LOC102619717

uncharacterized LOC107777346

uncharacterized LOC107816607

uncharacterized LOC107812754

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	3
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	4
bdi00600	Sphingolipid metabolism	2
bdi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	3
bdi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00620	Pyruvate metabolism	3
tae03018	RNA degradation	3
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu04144	Endocytosis	2
hvu04145	Phagosome	2
hvu04148	Efferocytosis	2
hvu04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00600	Sphingolipid metabolism	3
hvu04142	Lysosome	3
hvu04120	Ubiquitin mediated proteolysis	3
hvu04144	Endocytosis	2
hvu04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	4
osa04142	Lysosome	3
osa00592	alpha-Linolenic acid metabolism	2
osa01212	Fatty acid metabolism	2
osa00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	3
osa04136	Autophagy - other	3
osa00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00561	Glycerolipid metabolism	3
zma00566	Sulfoquinovose metabolism	3
zma00600	Sphingolipid metabolism	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00600	Sphingolipid metabolism	2
sbi04142	Lysosome	2
sbi04144	Endocytosis	2
sbi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00600	Sphingolipid metabolism	2
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	3
sly04120	Ubiquitin mediated proteolysis	2
sly04136	Autophagy - other	2
sly00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00600	Sphingolipid metabolism	3
sly04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00410	beta-Alanine metabolism	4
bra00240	Pyrimidine metabolism	3
bra00770	Pantothenate and CoA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo04136	Autophagy - other	2
ppo00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo04136	Autophagy - other	2
ppo00600	Sphingolipid metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	5
ghi00564	Glycerophospholipid metabolism	2
ghi00592	alpha-Linolenic acid metabolism	2
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	3
bna04142	Lysosome	3
bna00051	Fructose and mannose metabolism	2
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna00240	Pyrimidine metabolism	2
bna00410	beta-Alanine metabolism	2
bna00770	Pantothenate and CoA biosynthesis	2
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	3
bna04142	Lysosome	3
bna00051	Fructose and mannose metabolism	2
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01210	2-Oxocarboxylic acid metabolism	2
sot04142	Lysosome	2
sot00280	Valine, leucine and isoleucine degradation	2
sot04120	Ubiquitin mediated proteolysis	2
sot04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	4
nta04142	Lysosome	4
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	4
nta04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	4
nta04142	Lysosome	4

Expression

Expression pattern

Entrez Gene ID^*

100840730

100830063

100827618

123143011

123060305

123091516

123442834

123396456

123448086

9267024

4349589

100282421

103641698

103652878

8066948

110433828

8066766

824336

831924

100812470

100802366

100527899

101253930

101266578

103860725

103841113

100255017

100248250

7487357

7482573

11433621

107914554

107903579

107896756

125596749

106367756

106448278

102602502

102600401

102619717

107777346

107816607

107812754

The preparation time of this page was 0.1 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	2	3	2	2	2	2	1	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100840730 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840730 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**