ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100840998	uncharacterized LOC100840998
tae-r.2	123045376	uncharacterized LOC123045376
tae-r.2	123053218	uncharacterized LOC123053218
tae-r.2	123189128	uncharacterized LOC123189128
hvu-r.1	123426630	uncharacterized LOC123426630
osa-u.5	4335753	uridylate kinase PUMPKIN, chloroplastic
zma-u.5	100383551	uncharacterized LOC100383551
sbi-r.1	8072072	uncharacterized LOC8072072
ath-u.5	AT3G10030	aspartate/glutamate/uridylate kinase family protein
gma-u.5	106797796	uncharacterized LOC106797796
gma-u.5	102662374	uridylate kinase
gma-u.5	100805459	uridylate kinase
sly-u.5	101247746	uridylate kinase PUMPKIN, chloroplastic
bra-r.6	103870495	uncharacterized LOC103870495
vvi-u.5	100260933	uridylate kinase PUMPKIN, chloroplastic
vvi-u.5	100264768	uncharacterized LOC100264768
ppo-u.5	7494905	uncharacterized LOC7494905
ppo-u.5	18100083	uridylate kinase PUMPKIN, chloroplastic
ppo-u.5	7468468	uncharacterized LOC7468468
mtr-u.5	11425045	uncharacterized LOC11425045
ghi-r.1	121223561	uncharacterized LOC121223561
ghi-r.1	107944878	uncharacterized LOC107944878
bna-r.1	106408006	uncharacterized LOC106408006
bna-r.1	125587922	uncharacterized LOC125587922
sot-r.1	102600206	uncharacterized LOC102600206
cit-r.1	102626624	uncharacterized LOC102626624
cit-r.1	102619123	uncharacterized LOC102619123
nta-r.1	107830804	uncharacterized LOC107830804
nta-r.1	107798398	uncharacterized LOC107798398

Annotation

functional annotation

KEGG

GO BP

GO:0006225 [list] [network] UDP biosynthetic process

(5 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(4615 genes)

IEA

GO MF

GO:0033862 [list] [network] UMP kinase activity

(5 genes)

IEA

Protein

XP_003581179.1 [sequence] [blastp]
XP_010239859.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_003581179.1)
nucl 9, cyto 1, plas 1, cyto_plas 1	(predict for XP_010239859.1)

Subcellular
localization
TargetP

other 7, chlo 3	(predict for XP_003581179.1)
other 7, chlo 3	(predict for XP_010239859.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100840998	tae-r.2 for 123045376	tae-r.2 for 123053218	tae-r.2 for 123189128	hvu-r.1 for 123426630	osa-u.5 for 4335753	zma-u.5 for 100383551	sbi-r.1 for 8072072	ath-u.5 for AT3G10030	gma-u.5 for 106797796	gma-u.5 for 102662374	gma-u.5 for 100805459	sly-u.5 for 101247746	bra-r.6 for 103870495	vvi-u.5 for 100260933	vvi-u.5 for 100264768	ppo-u.5 for 7494905	ppo-u.5 for 18100083	ppo-u.5 for 7468468	mtr-u.5 for 11425045	ghi-r.1 for 121223561	ghi-r.1 for 107944878	bna-r.1 for 106408006	bna-r.1 for 125587922	sot-r.1 for 102600206	cit-r.1 for 102626624	cit-r.1 for 102619123	nta-r.1 for 107830804	nta-r.1 for 107798398

Ortholog

Ortholog ID: 7202

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100840998

uncharacterized LOC123045376

uncharacterized LOC123053218

uncharacterized LOC123189128

uncharacterized LOC123426630

uridylate kinase PUMPKIN, chloroplastic

uncharacterized LOC100383551

uncharacterized LOC8072072

aspartate/glutamate/uridylate kinase family protein

uridylate kinase

uncharacterized LOC100805176

uridylate kinase

uridylate kinase PUMPKIN, chloroplastic

uncharacterized LOC103870495

uridylate kinase PUMPKIN, chloroplastic

uncharacterized LOC100264768

uncharacterized LOC7494905

uridylate kinase PUMPKIN, chloroplastic

uncharacterized LOC7468468

uncharacterized LOC11425045

uncharacterized LOC121223561

uncharacterized LOC107944878

uncharacterized LOC106408006

uncharacterized LOC125587922

uncharacterized LOC102600206

uncharacterized LOC102626624

uncharacterized LOC102619123

uncharacterized LOC107830804

uncharacterized LOC107798398

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae03015	mRNA surveillance pathway	3
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae03015	mRNA surveillance pathway	3
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2
ppo03015	mRNA surveillance pathway	2
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	2
ppo00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna03015	mRNA surveillance pathway	2
bna03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna03015	mRNA surveillance pathway	2
bna03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	3
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit00562	Inositol phosphate metabolism	2
cit04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	3
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	8
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	8
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100840998

123045376

123053218

123189128

123426630

4335753

100383551

8072072

820164

100805459

100805176

100791426

101247746

103870495

100260933

100264768

7494905

18100083

7468468

11425045

121223561

107944878

106408006

125587922

102600206

102626624

102619123

107830804

107798398

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100840998 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840998 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	1	1	1	1	3	1	1	2	3	1	2	2	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100840998 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840998 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**