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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100841007   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 tae-r.2   123052664   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 tae-r.2   123188470   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 hvu-r.1   123426031   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 osa-u.5   4343276   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 zma-u.5   103647697   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 sbi-r.1   8077472   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 ath-u.5   SRS2   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100808973   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 sly-u.5   101245828   ATP-dependent DNA helicase SRS2-like 
 bra-r.6   103861531   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 vvi-u.5   100242461   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 mtr-u.5   11433288   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 ghi-r.1   107931442   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 bna-r.1   106361730   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 bna-r.1   106411227   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 sot-r.1   102601979   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 nta-r.1   107776697   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 nta-r.1   107819684   ATP-dependent DNA helicase SRS2-like protein At4g25120 
 cre-r.1   CHLRE_07g343333v5   uncharacterized protein 
 cre-r.1   CHLRE_07g312250v5   uncharacterized protein 

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Top 50 coexpressed genes to 100841007 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100841007 (bdi-r.1 coexpression data)

CoexMap"100841007"


bdiLOC100841007 | Entrez gene ID : 100841007      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi mtr ghi bna sot nta cre ppo cit
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 2 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000725 [list] [network] recombinational repair  (83 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (13 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (2605 genes)  IEA  
Protein XP_003563083.1 [sequence] [blastp]
XP_024316735.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_003563083.1)
nucl 5,  mito 2,  pero 1,  chlo_mito 1  (predict for XP_024316735.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003563083.1)
chlo 8  (predict for XP_024316735.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100841007
tae-r.2
for
123052664
tae-r.2
for
123188470
hvu-r.1
for
123426031
osa-u.5
for
4343276
zma-u.5
for
103647697
sbi-r.1
for
8077472
ath-u.5
for
SRS2
gma-u.5
for
100808973
sly-u.5
for
101245828
bra-r.6
for
103861531
vvi-u.5
for
100242461
mtr-u.5
for
11433288
ghi-r.1
for
107931442
bna-r.1
for
106361730
bna-r.1
for
106411227
sot-r.1
for
102601979
nta-r.1
for
107776697
nta-r.1
for
107819684
cre-r.1
for
CHLRE_07g343333v5
cre-r.1
for
CHLRE_07g312250v5


Ortholog ID: 11373
Species bdi tae tae hvu osa zma sbi ath gma sly bra vvi mtr ghi bna bna sot nta nta cre cre
Symbol LOC100841007 LOC123052664 LOC123188470 LOC123426031 LOC4343276 LOC103647697 LOC8077472 SRS2 LOC100808973 LOC101245828 LOC103861531 LOC100242461 LOC11433288 LOC107931442 LOC106361730 LOC106411227 LOC102601979 LOC107776697 LOC107819684 CHLRE_07g343333v5 CHLRE_07g312250v5
Function* ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 P-loop containing nucleoside triphosphate hydrolases superfamily protein ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 ATP-dependent DNA helicase SRS2-like protein At4g25120 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 5
ath03410 Base excision repair 3
ath03030 DNA replication 3
ath03460 Fanconi anemia pathway 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
sly03030 DNA replication 2
sly03410 Base excision repair 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 6
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100841007 123052664 123188470 123426031 4343276 103647697 8077472 828615 100808973 101245828 103861531 100242461 11433288 107931442 106361730 106411227 102601979 107776697 107819684 5718121 5726500
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