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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100843502   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 tae-r.2   123105858   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 tae-r.2   123098920   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 tae-r.2   123093668   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 hvu-r.1   123449738   pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like 
 osa-u.5   107278775   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 sbi-r.1   8085604   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 ath-u.5   AT4G35130   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103831270   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 vvi-u.5   100264174   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 ghi-r.1   107947332   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 ghi-r.1   107921211   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 bna-r.1   111213755   pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like 
 bna-r.1   106375270   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 
 cit-r.1   102620196   pentatricopeptide repeat-containing protein At4g35130, chloroplastic 

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Top 50 coexpressed genes to 100843502 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100843502 (bdi-r.1 coexpression data)

CoexMap"100843502"


bdiLOC100843502 | Entrez gene ID : 100843502    
Species bdi tae hvu osa sbi ath bra vvi ghi bna cit gma sot zma cre ppo sly nta mtr
Paralog 1 3 1 1 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_024312534.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_024312534.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_024312534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100843502
tae-r.2
for
123105858
tae-r.2
for
123098920
tae-r.2
for
123093668
hvu-r.1
for
123449738
osa-u.5
for
107278775
sbi-r.1
for
8085604
ath-u.5
for
AT4G35130
bra-r.6
for
103831270
vvi-u.5
for
100264174
ghi-r.1
for
107947332
ghi-r.1
for
107921211
bna-r.1
for
111213755
bna-r.1
for
106375270
cit-r.1
for
102620196


Ortholog ID: 13187
Species bdi tae tae tae hvu osa sbi ath bra vvi ghi ghi bna bna cit
Symbol LOC100843502 LOC123105858 LOC123098920 LOC123093668 LOC123449738 LOC107278775 LOC8085604 AT4G35130 LOC103831270 LOC100264174 LOC107947332 LOC107921211 LOC111213755 LOC106375270 LOC102620196
Function* pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like pentatricopeptide repeat-containing protein At4g35130, chloroplastic pentatricopeptide repeat-containing protein At4g35130, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00740 Riboflavin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100843502 123105858 123098920 123093668 123449738 107278775 8085604 829665 103831270 100264174 107947332 107921211 111213755 106375270 102620196
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