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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  100845534  putative pentatricopeptide repeat-containing protein At1g02420 
 tae-r.2  123098323  putative pentatricopeptide repeat-containing protein At1g02420 
 tae-r.2  123093042  putative pentatricopeptide repeat-containing protein At1g02420 
 hvu-r.1  123449370  putative pentatricopeptide repeat-containing protein At1g02420 
 osa-u.5  4332013  putative pentatricopeptide repeat-containing protein At1g02420 
 zma-u.5  100304284  uncharacterized LOC100304284 
 gma-u.5  100798456  putative pentatricopeptide repeat-containing protein At1g02420 
 sly-u.5  101259811  putative pentatricopeptide repeat-containing protein At1g02420 
 bra-r.6  103836652  putative pentatricopeptide repeat-containing protein At1g02420 
 vvi-u.5  100245186  putative pentatricopeptide repeat-containing protein At1g02420 
 ppo-u.5  7456271  putative pentatricopeptide repeat-containing protein At1g02420 
 mtr-u.5  11415936  putative pentatricopeptide repeat-containing protein At1g02420 
 ghi-r.1  107924181  putative pentatricopeptide repeat-containing protein At1g02420 
 ghi-r.1  107912299  putative pentatricopeptide repeat-containing protein At1g02420 
 bna-r.1  111211305  putative pentatricopeptide repeat-containing protein At1g02420 
 bna-r.1  106397846  putative pentatricopeptide repeat-containing protein At1g02420 
 bna-r.1  125576679  putative pentatricopeptide repeat-containing protein At1g02420 
 sot-r.1  102601203  putative pentatricopeptide repeat-containing protein At1g02420 
 cit-r.1  102617160  putative pentatricopeptide repeat-containing protein At1g02420 
 nta-r.1  107827160  putative pentatricopeptide repeat-containing protein At1g02420 
 nta-r.1  107796606  putative pentatricopeptide repeat-containing protein At1g02420 

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Top 50 coexpressed genes to 100845534 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100845534 (bdi-r.1 coexpression data)

CoexMap"100845534"


bdiLOC100845534 | Entrez gene ID : 100845534
Species bdi tae hvu osa zma gma sly bra vvi ppo mtr ghi bna sot cit nta cre sbi ath
Paralog 1 2 1 1 1 1 1 1 1 1 1 2 3 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003558534.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo_mito 5,  chlo 2  (predict for XP_003558534.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_003558534.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
100845534


tae-r.2
for
123098323


tae-r.2
for
123093042


hvu-r.1
for
123449370


osa-u.5
for
4332013


zma-u.5
for
100304284


gma-u.5
for
100798456


sly-u.5
for
101259811


bra-r.6
for
103836652


vvi-u.5
for
100245186


ppo-u.5
for
7456271


mtr-u.5
for
11415936


ghi-r.1
for
107924181


ghi-r.1
for
107912299


bna-r.1
for
111211305


bna-r.1
for
106397846


bna-r.1
for
125576679


sot-r.1
for
102601203


cit-r.1
for
102617160


nta-r.1
for
107827160


nta-r.1
for
107796606



Ortholog ID: 9772
Species bdi tae tae hvu osa zma gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100845534 LOC123098323 LOC123093042 LOC123449370 LOC4332013 LOC100304284 LOC100798456 LOC101259811 LOC103836652 LOC100245186 LOC7456271 LOC11415936 LOC107924181 LOC107912299 LOC111211305 LOC106397846 LOC125596613 LOC102601203 LOC102617160 LOC107827160 LOC107796606
Function* putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 uncharacterized LOC100304284 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420 putative pentatricopeptide repeat-containing protein At1g02420
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100845534 123098323 123093042 123449370 4332013 100304284 100798456 101259811 103836652 100245186 7456271 11415936 107924181 107912299 111211305 106397846 125596613 102601203 102617160 107827160 107796606
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