ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100852566	uncharacterized LOC100852566
vvi-r.5	100852566	uncharacterized LOC100852566
vvi-m.5	100852566	uncharacterized LOC100852566
vvi-u.5	104880931	uncharacterized LOC104880931
ath-u.5	AT4G12670	Homeodomain-like superfamily protein
ath-u.5	TRFL10	TRF-like 10
ath-u.5	AT1G14770	RING/FYVE/PHD zinc finger superfamily protein
gma-u.5	100806195	neurofilament medium polypeptide
gma-u.5	100787956	cylicin-2
gma-u.5	102661885	uncharacterized LOC102661885
ppo-u.5	7471749	uncharacterized LOC7471749
ppo-u.5	7484006	uncharacterized LOC7484006
mtr-u.5	11429054	uncharacterized LOC11429054
mtr-u.5	11421590	uncharacterized LOC11421590
sly-u.5	101258507	uncharacterized LOC101258507
sly-u.5	101252503	uncharacterized LOC101252503
sly-u.5	104646307	uncharacterized LOC104646307

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_010653800.1 [sequence] [blastp]
XP_059595306.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto_nucl 4, plas 1, golg 1, golg_plas 1	(predict for XP_010653800.1)
nucl 8, cyto_nucl 4, plas 1, golg 1, golg_plas 1	(predict for XP_059595306.1)

Subcellular
localization
TargetP

scret 3, other 3	(predict for XP_010653800.1)
scret 3, other 3	(predict for XP_059595306.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100852566	vvi-r.5 for 100852566	vvi-m.5 for 100852566	vvi-u.5 for 104880931	ath-u.5 for AT4G12670	ath-u.5 for TRFL10	ath-u.5 for AT1G14770	gma-u.5 for 100806195	gma-u.5 for 100787956	gma-u.5 for 102661885	ppo-u.5 for 7471749	ppo-u.5 for 7484006	mtr-u.5 for 11429054	mtr-u.5 for 11421590	sly-u.5 for 101258507	sly-u.5 for 101252503	sly-u.5 for 104646307

Ortholog

Ortholog ID: 2919

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC104880931

uncharacterized LOC100852566

RING/FYVE/PHD zinc finger superfamily protein

neurofilament medium polypeptide

cylicin-2

uncharacterized LOC103837245

uncharacterized LOC7484006

uncharacterized LOC11421590

uncharacterized LOC11429054

uncharacterized LOC107910957

uncharacterized LOC107933998

uncharacterized BNAA06G10880D

uncharacterized LOC102612342

uncharacterized LOC102624735

uncharacterized LOC101258507

uncharacterized LOC101252503

uncharacterized LOC102593143

uncharacterized LOC102589560

uncharacterized LOC107766321

uncharacterized LOC107774792

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03440	Homologous recombination	2
ath03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr00510	N-Glycan biosynthesis	3
mtr00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr01210	2-Oxocarboxylic acid metabolism	2
mtr01230	Biosynthesis of amino acids	2
mtr04142	Lysosome	2
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4
ghi03040	Spliceosome	3
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00909	Sesquiterpenoid and triterpenoid biosynthesis	4
sot00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta03040	Spliceosome	3
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

104880931

100852566

838042

100806195

100787956

103837245

7484006

11421590

11429054

107910957

107933998

106349863

102612342

102624735

101258507

101252503

102593143

102589560

107766321

107774792

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100852566 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100852566 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	4	3	3	2	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100852566 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100852566 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**