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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100852748   CST complex subunit STN1 
 vvi-r.5   100852748   CST complex subunit STN1 
 ppo-u.5   7464695   CST complex subunit STN1 
 mtr-u.5   25482600   CST complex subunit STN1 
 mtr-u.5   11407523   CST complex subunit STN1 
 ghi-r.1   107936804   CST complex subunit STN1 
 ghi-r.1   121219360   CST complex subunit STN1 
 bna-r.1   125591500   CST complex subunit STN1-like 
 bna-r.1   125575294   CST complex subunit STN1-like 
 sly-u.5   101268436   CST complex subunit STN1 
 nta-r.1   107790289   CST complex subunit STN1-like 
 nta-r.1   107787267   CST complex subunit STN1 
 osa-u.5   4332917   CST complex subunit STN1 
 zma-u.5   100285101   OB-fold nucleic acid binding domain containing protein 
 tae-r.2   123063439   CST complex subunit STN1 
 hvu-r.1   123442655   CST complex subunit STN1-like 
 hvu-r.1   123445476   CST complex subunit STN1-like 
 sbi-r.1   8080782   CST complex subunit STN1 
 bdi-r.1   100835142   CST complex subunit STN1 

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Top 50 coexpressed genes to 100852748 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100852748 (vvi-u.5 coexpression data)

CoexMap"100852748"


vviLOC100852748 | Entrez gene ID : 100852748    
Species vvi ppo mtr ghi bna sly nta osa zma tae hvu sbi bdi cit ath gma cre sot bra
Paralog 2 1 2 2 2 1 2 1 1 1 2 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (31 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (64 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (115 genes)  IEA  
GO CC
GO:0000781 [list] [network] chromosome, telomeric region  (6 genes)  IEA  
GO:0005662 [list] [network] DNA replication factor A complex  (6 genes)  IEA  
GO:0035861 [list] [network] site of double-strand break  (9 genes)  IEA  
GO MF
GO:0003676 [list] [network] nucleic acid binding  (3261 genes)  IEA  
Protein XP_010651993.1 [sequence] [blastp]
XP_010651994.1 [sequence] [blastp]
XP_010651995.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_010651993.1)
chlo 6,  chlo_mito 4,  nucl 3  (predict for XP_010651994.1)
chlo 6,  chlo_mito 4,  vacu 1,  mito 1  (predict for XP_010651995.1)
Subcellular
localization
TargetP
chlo 1  (predict for XP_010651993.1)
chlo 1  (predict for XP_010651994.1)
chlo 1  (predict for XP_010651995.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100852748
vvi-r.5
for
100852748
ppo-u.5
for
7464695
mtr-u.5
for
25482600
mtr-u.5
for
11407523
ghi-r.1
for
107936804
ghi-r.1
for
121219360
bna-r.1
for
125591500
bna-r.1
for
125575294
sly-u.5
for
101268436
nta-r.1
for
107790289
nta-r.1
for
107787267
osa-u.5
for
4332917
zma-u.5
for
100285101
tae-r.2
for
123063439
hvu-r.1
for
123442655
hvu-r.1
for
123445476
sbi-r.1
for
8080782
bdi-r.1
for
100835142


Ortholog ID: 6692
Species vvi ppo mtr mtr ghi ghi bna bna sly nta nta osa zma tae hvu hvu sbi bdi
Symbol LOC100852748 LOC7464695 LOC25482600 LOC11407523 LOC107936804 LOC121219360 LOC125575294 LOC106362235 LOC101268436 LOC107790289 LOC107787267 LOC4332917 LOC100285101 LOC123063439 LOC123442655 LOC123445476 LOC8080782 LOC100835142
Function* CST complex subunit STN1 CST complex subunit STN1 CST complex subunit STN1 CST complex subunit STN1 CST complex subunit STN1 CST complex subunit STN1 CST complex subunit STN1-like CST complex subunit STN1 CST complex subunit STN1 CST complex subunit STN1-like CST complex subunit STN1 CST complex subunit STN1 OB-fold nucleic acid binding domain containing protein CST complex subunit STN1 CST complex subunit STN1-like CST complex subunit STN1-like CST complex subunit STN1 CST complex subunit STN1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 2
vvi03410 Base excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100852748 7464695 25482600 11407523 107936804 121219360 125575294 106362235 101268436 107790289 107787267 4332917 100285101 123063439 123442655 123445476 8080782 100835142
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