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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100853195   pentatricopeptide repeat-containing protein At5g48910 
 vvi-r.5   100853195   pentatricopeptide repeat-containing protein At5g48910 
 bra-r.6   103828526   pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like 
 ghi-r.1   107899357   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 cit-r.1   102610229   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 

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Top 50 coexpressed genes to 100853195 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100853195 (vvi-u.5 coexpression data)

CoexMap"100853195"


vviLOC100853195 | Entrez gene ID : 100853195    
Species vvi bra ghi cit osa nta bdi sot ppo tae sly ath zma mtr hvu sbi cre gma bna
Paralog 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010657439.1 [sequence] [blastp]
XP_010657440.1 [sequence] [blastp]
Subcellular
localization
wolf
mito_plas 2,  mito 1,  plas 1,  chlo 1,  extr 1,  golg 1,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_010657439.1)
mito 1,  mito_plas 1,  extr 1,  vacu 1,  golg 1,  plas 1,  E.R._vacu 1,  chlo 1,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_010657440.1)
Subcellular
localization
TargetP
other 3  (predict for XP_010657439.1)
other 3  (predict for XP_010657440.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100853195
vvi-r.5
for
100853195
bra-r.6
for
103828526
ghi-r.1
for
107899357
cit-r.1
for
102610229


Ortholog ID: 19742
Species vvi bra ghi cit
Symbol LOC100853195 LOC103828526 LOC107899357 LOC102610229
Function* pentatricopeptide repeat-containing protein At5g48910 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100853195 103828526 107899357 102610229
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