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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100853788   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 vvi-r.5   100853788   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 gma-u.5   102661989   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 gma-u.5   100809665   pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like 
 ppo-u.5   7464846   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 mtr-u.5   25492946   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 sly-u.5   101255488   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 osa-u.5   9269715   pentatricopeptide repeat-containing protein At1g03100, mitochondrial 
 zma-u.5   103626215   pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 100853788 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100853788 (vvi-u.5 coexpression data)

CoexMap"100853788"


vviLOC100853788 | Entrez gene ID : 100853788      
Species vvi gma ppo mtr sly osa zma bdi hvu bra cit bna ath sbi ghi sot nta cre tae
Paralog 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_003632339.1 [sequence] [blastp]
XP_010651991.1 [sequence] [blastp]
XP_019076395.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  plas 1,  pero 1,  cyto_mito 1  (predict for XP_003632339.1)
chlo 4,  nucl 4,  mito 1,  plas 1,  pero 1,  cyto_mito 1  (predict for XP_010651991.1)
chlo 4,  nucl 4,  mito 1,  plas 1,  pero 1,  cyto_mito 1  (predict for XP_019076395.1)
Subcellular
localization
TargetP
chlo 1  (predict for XP_003632339.1)
chlo 1  (predict for XP_010651991.1)
chlo 1  (predict for XP_019076395.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100853788
vvi-r.5
for
100853788
gma-u.5
for
102661989
gma-u.5
for
100809665
ppo-u.5
for
7464846
mtr-u.5
for
25492946
sly-u.5
for
101255488
osa-u.5
for
9269715
zma-u.5
for
103626215


Ortholog ID: 10487
Species vvi gma gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100853788 LOC102661989 LOC100809665 LOC103844533 LOC7464846 LOC25492946 LOC107960947 LOC121204924 LOC106397735 LOC106422948 LOC112495487 LOC101255488 LOC102595022 LOC107776040 LOC107776069 LOC9269715 LOC103626215 LOC123106066 LOC123093886 LOC123449963 LOC8064898 LOC100840932
Function* pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial pentatricopeptide repeat-containing protein At1g03100, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00040 Pentose and glucuronate interconversions 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100853788 102661989 100809665 103844533 7464846 25492946 107960947 121204924 106397735 106422948 112495487 101255488 102595022 107776040 107776069 9269715 103626215 123106066 123093886 123449963 8064898 100840932
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