ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100854085	pentatricopeptide repeat-containing protein At1g08070, chloroplastic
vvi-r.5	100854085	pentatricopeptide repeat-containing protein At1g08070, chloroplastic

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(500 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(811 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1286 genes)	IEA
GO:0005515 [list] [network] protein binding	(4232 genes)	IEA

Protein

XP_003632122.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 3, mito 1, cysk 1

(predict for XP_003632122.2)

Subcellular
localization
TargetP

scret 2

(predict for XP_003632122.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100854085 .	vvi-r.5 for 100854085 .

Ortholog ID: 36978

Species

vvi

sot

Symbol

LOC100854085

LOC102585110

Function^*

pentatricopeptide repeat-containing protein At1g08070, chloroplastic

pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100854085

102585110


Species	vvi	ppo	hvu	mtr	tae	nta	bra	cit	ghi	zma	bdi	sly	sbi	ath	cre	osa	sot	gma	bna
Paralog	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100854085 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100854085 (vvi-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100854085 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100854085 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**