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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245012   S-adenosylmethionine synthase 3-like 
 sly-r.6   101245012   S-adenosylmethionine synthase 3-like 
 sly-u.5   SAM1   S-adenosyl-L-methionine synthetase 
 sly-u.5   SAM3   S-adenosyl-L-methionine synthetase 
 sly-u.5   SAM2   S-adenosylmethionine synthase 2 
 ath-u.5   MAT3   methionine adenosyltransferase 3 
 ath-u.5   MTO3   S-adenosylmethionine synthetase family protein 
 ath-u.5   SAM-2   S-adenosylmethionine synthetase 2 
 gma-u.5   100805448   S-adenosylmethionine synthase 3 
 gma-u.5   100816602   S-adenosylmethionine synthase 1 
 gma-u.5   100812341   S-adenosylmethionine synthase 1 
 vvi-u.5   METK2   S-adenosylmethionine synthetase 2 
 vvi-u.5   METK3   S-adenosylmethionine synthetase 3 
 ppo-u.5   7495188   S-adenosylmethionine synthase 1-like 
 ppo-u.5   7478878   S-adenosylmethionine synthase 2-like 
 ppo-u.5   18100144   S-adenosylmethionine synthase 4-like 
 mtr-u.5   11444997   S-adenosylmethionine synthase 
 mtr-u.5   11432371   S-adenosylmethionine synthase 3 
 mtr-u.5   11435308   S-adenosylmethionine synthase-like 
 osa-u.5   4325163   S-adenosylmethionine synthase 3-like 
 osa-u.5   4326996   S-adenosylmethionine synthase 2-like 
 osa-u.5   4337733   S-adenosylmethionine synthase 1-like 
 zma-u.5   100282324   S-adenosylmethionine synthetase 1 
 zma-u.5   100191838   uncharacterized LOC100191838 
 zma-u.5   100194360   S-adenosylmethionine synthase 1 

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Top 50 coexpressed genes to 101245012 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245012 (sly-u.5 coexpression data)

CoexMap"101245012"


slyLOC101245012 | Entrez gene ID : 101245012      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00270 [list] [network] Cysteine and methionine metabolism (118 genes)
sly00670 [list] [network] One carbon pool by folate (40 genes)
sly00999 [list] [network] Biosynthesis of various plant secondary metabolites (56 genes)
sly01230 [list] [network] Biosynthesis of amino acids (226 genes)
sly01240 [list] [network] Biosynthesis of cofactors (247 genes)
GO BP
GO:0006556 [list] [network] S-adenosylmethionine biosynthetic process  (5 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0004478 [list] [network] methionine adenosyltransferase activity  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_010312254.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 5,  cyto 4  (predict for XP_010312254.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010312254.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245012

.
sly-r.6
for
101245012

.
sly-u.5
for
SAM1

.
sly-u.5
for
SAM3

.
sly-u.5
for
SAM2

.
ath-u.5
for
MAT3

.
ath-u.5
for
MTO3

.
ath-u.5
for
SAM-2

.
gma-u.5
for
100805448

.
gma-u.5
for
100816602

.
gma-u.5
for
100812341

.
vvi-u.5
for
METK2

.
vvi-u.5
for
METK3

.
ppo-u.5
for
7495188

.
ppo-u.5
for
7478878

.
ppo-u.5
for
18100144

.
mtr-u.5
for
11444997

.
mtr-u.5
for
11432371

.
mtr-u.5
for
11435308

.
osa-u.5
for
4325163

.
osa-u.5
for
4326996

.
osa-u.5
for
4337733

.
zma-u.5
for
100282324

.
zma-u.5
for
100191838

.
zma-u.5
for
100194360

.


Ortholog ID: 562
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol MTO3 SAM1 LOC100787994 LOC100777770 SAM2 SAM3 LOC4325163 LOC4337733 LOC100279822 LOC100194360 LOC103849483 LOC103839308 METK4 METK5 LOC7495188 LOC7478878 LOC11444997 LOC11435308 LOC123136783 LOC123145026 LOC123406099 LOC123405946 LOC107923999 LOC107922739 LOC106437889 LOC125596940 CHLRE_06g250200v5 LOC110433826 LOC8071284 METK1 LOC102578902 LOC102622739 LOC102618655 LOC100844978 LOC100843457 LOC107801863 LOC107764500
Function* S-adenosylmethionine synthetase family protein S-adenosylmethionine synthetase 1 S-adenosylmethionine synthase S-adenosylmethionine synthase 1 S-adenosylmethionine synthase 2 S-adenosyl-L-methionine synthetase S-adenosylmethionine synthase 3-like S-adenosylmethionine synthase 1-like methionine adenosyltransferase S-adenosylmethionine synthase 1 S-adenosylmethionine synthase 2 S-adenosylmethionine synthase 2 S-adenosylmethionine synthetase 4 S-adenosylmethionine synthetase 5 S-adenosylmethionine synthase 1-like S-adenosylmethionine synthase 2-like S-adenosylmethionine synthase S-adenosylmethionine synthase-like S-adenosylmethionine synthase S-adenosylmethionine synthase 3 S-adenosylmethionine synthase 2 S-adenosylmethionine synthase 3 S-adenosylmethionine synthase 2 S-adenosylmethionine synthase 2-like S-adenosylmethionine synthase 3 S-adenosylmethionine synthase 3 uncharacterized protein S-adenosylmethionine synthase 1 S-adenosylmethionine synthase 1 S-adenosylmethionine synthase 1-like S-adenosylmethionine synthase 2 S-adenosylmethionine synthase 1 S-adenosylmethionine synthase S-adenosylmethionine synthase 3 S-adenosylmethionine synthase 1 S-adenosylmethionine synthase 2-like S-adenosylmethionine synthase 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 7
ath01230 Biosynthesis of amino acids 6
ath00670 One carbon pool by folate 5
ath01240 Biosynthesis of cofactors 4
ath00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 8
gma01230 Biosynthesis of amino acids 7
gma01200 Carbon metabolism 6
gma01240 Biosynthesis of cofactors 6
gma00270 Cysteine and methionine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00670 One carbon pool by folate 7
gma01240 Biosynthesis of cofactors 6
gma00270 Cysteine and methionine metabolism 5
gma01230 Biosynthesis of amino acids 5
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00920 Sulfur metabolism 8
sly01320 Sulfur cycle 6
sly01230 Biosynthesis of amino acids 3
sly01240 Biosynthesis of cofactors 3
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00670 One carbon pool by folate 4
sly00270 Cysteine and methionine metabolism 4
sly01200 Carbon metabolism 3
sly01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
osa01230 Biosynthesis of amino acids 2
osa00220 Arginine biosynthesis 2
osa00250 Alanine, aspartate and glutamate metabolism 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 8
osa01230 Biosynthesis of amino acids 6
osa00270 Cysteine and methionine metabolism 4
osa00670 One carbon pool by folate 4
osa00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 6
zma01230 Biosynthesis of amino acids 6
zma00670 One carbon pool by folate 5
zma01240 Biosynthesis of cofactors 3
zma00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00270 Cysteine and methionine metabolism 7
zma00940 Phenylpropanoid biosynthesis 6
zma00670 One carbon pool by folate 5
zma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 5
bra01230 Biosynthesis of amino acids 5
bra00670 One carbon pool by folate 3
bra00999 Biosynthesis of various plant secondary metabolites 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 5
bra01250 Biosynthesis of nucleotide sugars 5
bra00270 Cysteine and methionine metabolism 3
bra01230 Biosynthesis of amino acids 3
bra01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00670 One carbon pool by folate 7
vvi00940 Phenylpropanoid biosynthesis 6
vvi01230 Biosynthesis of amino acids 5
vvi00260 Glycine, serine and threonine metabolism 4
vvi00630 Glyoxylate and dicarboxylate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 8
ppo01230 Biosynthesis of amino acids 5
ppo01240 Biosynthesis of cofactors 5
ppo01200 Carbon metabolism 4
ppo00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00270 Cysteine and methionine metabolism 11
ppo01230 Biosynthesis of amino acids 10
ppo00670 One carbon pool by folate 8
ppo01240 Biosynthesis of cofactors 6
ppo00450 Selenocompound metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr00270 Cysteine and methionine metabolism 8
mtr00670 One carbon pool by folate 8
mtr01240 Biosynthesis of cofactors 5
mtr01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00670 One carbon pool by folate 14
tae00270 Cysteine and methionine metabolism 12
tae01230 Biosynthesis of amino acids 11
tae01240 Biosynthesis of cofactors 8
tae00999 Biosynthesis of various plant secondary metabolites 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 7
hvu00270 Cysteine and methionine metabolism 6
hvu00670 One carbon pool by folate 6
hvu01240 Biosynthesis of cofactors 5
hvu00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 6
hvu00270 Cysteine and methionine metabolism 5
hvu00670 One carbon pool by folate 5
hvu01200 Carbon metabolism 4
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 7
ghi00670 One carbon pool by folate 7
ghi00999 Biosynthesis of various plant secondary metabolites 7
ghi01230 Biosynthesis of amino acids 7
ghi01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 7
ghi00670 One carbon pool by folate 7
ghi00999 Biosynthesis of various plant secondary metabolites 7
ghi01230 Biosynthesis of amino acids 7
ghi01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 9
bna00670 One carbon pool by folate 9
bna00999 Biosynthesis of various plant secondary metabolites 9
bna01230 Biosynthesis of amino acids 9
bna01240 Biosynthesis of cofactors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 9
bna00670 One carbon pool by folate 9
bna00999 Biosynthesis of various plant secondary metabolites 9
bna01230 Biosynthesis of amino acids 9
bna01240 Biosynthesis of cofactors 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00270 Cysteine and methionine metabolism 5
cre00670 One carbon pool by folate 4
cre01200 Carbon metabolism 4
cre00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 11
sbi00360 Phenylalanine metabolism 7
sbi01230 Biosynthesis of amino acids 5
sbi00270 Cysteine and methionine metabolism 4
sbi00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 8
sbi00270 Cysteine and methionine metabolism 6
sbi00670 One carbon pool by folate 6
sbi01240 Biosynthesis of cofactors 4
sbi00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03040 Spliceosome 2
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00670 One carbon pool by folate 7
sot01240 Biosynthesis of cofactors 6
sot00270 Cysteine and methionine metabolism 6
sot01230 Biosynthesis of amino acids 5
sot01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 4
cit01230 Biosynthesis of amino acids 4
cit01200 Carbon metabolism 3
cit00940 Phenylpropanoid biosynthesis 3
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 10
cit00270 Cysteine and methionine metabolism 5
cit00670 One carbon pool by folate 5
cit01240 Biosynthesis of cofactors 4
cit00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 5
bdi00670 One carbon pool by folate 5
bdi00270 Cysteine and methionine metabolism 4
bdi01240 Biosynthesis of cofactors 3
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00270 Cysteine and methionine metabolism 6
bdi00670 One carbon pool by folate 5
bdi00450 Selenocompound metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 8
nta01230 Biosynthesis of amino acids 8
nta00670 One carbon pool by folate 6
nta00999 Biosynthesis of various plant secondary metabolites 6
nta01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 8
nta01230 Biosynthesis of amino acids 8
nta00670 One carbon pool by folate 6
nta00999 Biosynthesis of various plant secondary metabolites 6
nta01240 Biosynthesis of cofactors 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821003 839501 100787994 100777770 101247506 544302 4325163 4337733 100279822 100194360 103849483 103839308 100251171 100243560 7495188 7478878 11444997 11435308 123136783 123145026 123406099 123405946 107923999 107922739 106437889 125596940 5722217 110433826 8071284 102588511 102578902 102622739 102618655 100844978 100843457 107801863 107764500
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