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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245417   amino acid transporter AVT1C 
 sly-r.6   101245417   amino acid transporter AVT1C 
 sly-m.5   101245417   amino acid transporter AVT1C 
 sly-u.5   101255449   amino acid transporter AVT1D-like 
 sly-u.5   101265407   amino acid transporter AVT1C 
 sot-r.1   102603292   vacuolar amino acid transporter 1-like 
 sot-r.1   102600215   vacuolar amino acid transporter 1 
 sot-r.1   102591835   vacuolar amino acid transporter 1-like 
 nta-r.1   107820479   amino acid transporter AVT1C 
 nta-r.1   107805489   amino acid transporter AVT1E-like 
 nta-r.1   107816774   amino acid transporter AVT1C 
 ath-u.5   AT2G39130   Transmembrane amino acid transporter family protein 
 gma-u.5   100781123   amino acid transporter AVT1C 
 gma-u.5   100775840   amino acid transporter AVT1C 
 gma-u.5   100810530   amino acid transporter AVT1C 
 bra-r.6   103841386   amino acid transporter AVT1B 
 bra-r.6   103847472   amino acid transporter AVT1D 
 vvi-u.5   100249618   amino acid transporter AVT1C 
 ppo-u.5   7494940   amino acid transporter AVT1C 
 ppo-u.5   7463447   amino acid transporter AVT1C 
 mtr-u.5   11422386   amino acid transporter AVT1C 
 mtr-u.5   25483227   amino acid transporter AVT1C 
 ghi-r.1   121217950   amino acid transporter AVT1C 
 ghi-r.1   107957357   amino acid transporter AVT1C 
 bna-r.1   106415475   amino acid transporter AVT1B 
 bna-r.1   106406203   amino acid transporter AVT1B 
 bna-r.1   106402868   amino acid transporter AVT1C-like 
 cit-r.1   102610182   amino acid transporter AVT1D 
 cit-r.1   102623467   amino acid transporter AVT1C 
 osa-u.5   9269491   amino acid transporter AVT1C 
 osa-u.5   4327977   amino acid transporter AVT1C 
 zma-u.5   100284302   uncharacterized LOC100284302 
 zma-u.5   103650516   amino acid transporter AVT1C 
 tae-r.2   123135349   amino acid transporter AVT1C 
 hvu-r.1   123429207   amino acid transporter AVT1C-like 
 sbi-r.1   8083429   amino acid transporter ANTL3 
 sbi-r.1   8074153   amino acid transporter ANTL2 
 bdi-r.1   100823848   amino acid transporter AVT1B 
 bdi-r.1   100845305   amino acid transporter AVT1C 

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Top 50 coexpressed genes to 101245417 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245417 (sly-u.5 coexpression data)

CoexMap"101245417"


slyLOC101245417 | Entrez gene ID : 101245417      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 3 3 1 3 2 1 2 2 2 3 2 2 2 1 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04082 [list] [network] Neuroactive ligand signaling (10 genes)
GO BP
GO:0003333 [list] [network] amino acid transmembrane transport  (59 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3085 genes)  IEA  
GO MF
GO:0015171 [list] [network] amino acid transmembrane transporter activity  (72 genes)  IEA  
Protein XP_004250060.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 3,  nucl_plas 3,  golg_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for XP_004250060.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004250060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245417
sly-r.6
for
101245417
sly-m.5
for
101245417
sly-u.5
for
101255449
sly-u.5
for
101265407
sot-r.1
for
102603292
sot-r.1
for
102600215
sot-r.1
for
102591835
nta-r.1
for
107820479
nta-r.1
for
107805489
nta-r.1
for
107816774
ath-u.5
for
AT2G39130
gma-u.5
for
100781123
gma-u.5
for
100775840
gma-u.5
for
100810530
bra-r.6
for
103841386
bra-r.6
for
103847472
vvi-u.5
for
100249618
ppo-u.5
for
7494940
ppo-u.5
for
7463447
mtr-u.5
for
11422386
mtr-u.5
for
25483227
ghi-r.1
for
121217950
ghi-r.1
for
107957357
bna-r.1
for
106415475
bna-r.1
for
106406203
bna-r.1
for
106402868
cit-r.1
for
102610182
cit-r.1
for
102623467
osa-u.5
for
9269491
osa-u.5
for
4327977
zma-u.5
for
100284302
zma-u.5
for
103650516
tae-r.2
for
123135349
hvu-r.1
for
123429207
sbi-r.1
for
8083429
sbi-r.1
for
8074153
bdi-r.1
for
100823848
bdi-r.1
for
100845305


Ortholog ID: 1038
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi ppo ppo mtr mtr ghi bna bna cit cit osa osa zma zma zma tae hvu sbi sbi bdi bdi
Symbol LOC101245417 LOC101255449 LOC101265407 LOC102603292 LOC102600215 LOC102591835 LOC107805489 LOC107816774 LOC107769961 AT2G39130 AT3G54830 AT5G02180 LOC100781123 LOC100810530 LOC100798108 LOC103847472 LOC103855450 LOC103865703 LOC100249618 LOC7494940 LOC7463447 LOC11422386 LOC25498515 LOC107915821 LOC106448915 LOC106443019 LOC102610182 LOC102623467 LOC9269491 LOC4327977 LOC100284302 LOC103640076 LOC100281395 LOC123135349 LOC123429207 LOC8074153 LOC8073048 LOC100823848 LOC100845305
Function* amino acid transporter AVT1C amino acid transporter AVT1D-like amino acid transporter AVT1C vacuolar amino acid transporter 1-like vacuolar amino acid transporter 1 vacuolar amino acid transporter 1-like amino acid transporter AVT1E-like amino acid transporter AVT1C amino acid transporter AVT1C Transmembrane amino acid transporter family protein Transmembrane amino acid transporter family protein Transmembrane amino acid transporter family protein amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1D amino acid transporter AVT1E amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1D amino acid transporter AVT1C amino acid transporter AVT1E-like amino acid transporter AVT1E-like amino acid transporter AVT1D amino acid transporter AVT1C amino acid transporter AVT1C amino acid transporter AVT1C uncharacterized LOC100284302 uncharacterized LOC103640076 uncharacterized LOC100281395 amino acid transporter AVT1C amino acid transporter AVT1C-like amino acid transporter ANTL2 vacuolar amino acid transporter 1 amino acid transporter AVT1B amino acid transporter AVT1C
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00650 Butanoate metabolism 2
sly04016 MAPK signaling pathway - plant 2
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly00480 Glutathione metabolism 2
sly00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 3
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 6
sot01250 Biosynthesis of nucleotide sugars 6
sot00010 Glycolysis / Gluconeogenesis 2
sot00030 Pentose phosphate pathway 2
sot00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
nta04082 Neuroactive ligand signaling 2
nta00260 Glycine, serine and threonine metabolism 2
nta00310 Lysine degradation 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03015 mRNA surveillance pathway 2
nta00910 Nitrogen metabolism 2
nta01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
nta00260 Glycine, serine and threonine metabolism 3
nta04082 Neuroactive ligand signaling 2
nta00310 Lysine degradation 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00910 Nitrogen metabolism 4
ath01310 Nitrogen cycle 3
ath00030 Pentose phosphate pathway 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00562 Inositol phosphate metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00290 Valine, leucine and isoleucine biosynthesis 2
gma00770 Pantothenate and CoA biosynthesis 2
gma00966 Glucosinolate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 4
cit00500 Starch and sucrose metabolism 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00511 Other glycan degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04082 Neuroactive ligand signaling 2
zma04148 Efferocytosis 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04082 Neuroactive ligand signaling 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00910 Nitrogen metabolism 2
hvu01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi00510 N-Glycan biosynthesis 4
bdi00513 Various types of N-glycan biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245417 101255449 101265407 102603292 102600215 102591835 107805489 107816774 107769961 818499 824648 831862 100781123 100810530 100798108 103847472 103855450 103865703 100249618 7494940 7463447 11422386 25498515 107915821 106448915 106443019 102610182 102623467 9269491 4327977 100284302 103640076 100281395 123135349 123429207 8074153 8073048 100823848 100845305
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