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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245529   uncharacterized LOC101245529 
 sly-r.6   101245529   uncharacterized LOC101245529 
 sly-u.5   101264998   uncharacterized LOC101264998 
 ath-u.5   AT5G61970   signal recognition particle-related / SRP-like protein 
 gma-u.5   100816486   signal recognition particle subunit SRP68 
 gma-u.5   100777159   signal recognition particle subunit SRP68 
 vvi-u.5   100262919   signal recognition particle 68 kDa protein-like 
 ppo-u.5   7457578   uncharacterized LOC7457578 
 ppo-u.5   7454597   uncharacterized LOC7454597 
 mtr-u.5   11442989   signal recognition particle subunit SRP68 
 osa-u.5   4345269   uncharacterized LOC4345269 
 zma-u.5   100192526   uncharacterized LOC100192526 

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Top 50 coexpressed genes to 101245529 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245529 (sly-u.5 coexpression data)

CoexMap"101245529"


slyLOC101245529 | Entrez gene ID : 101245529      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03060 [list] [network] Protein export (57 genes)
GO BP
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (21 genes)  IEA  
GO CC
GO:0005786 [list] [network] signal recognition particle, endoplasmic reticulum targeting  (8 genes)  IEA  
GO MF
GO:0005047 [list] [network] signal recognition particle binding  (4 genes)  IEA  
GO:0030942 [list] [network] endoplasmic reticulum signal peptide binding  (5 genes)  IEA  
GO:0008312 [list] [network] 7S RNA binding  (9 genes)  IEA  
Protein XP_004235198.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  nucl_plas 1,  plas 1,  cysk 1,  golg 1  (predict for XP_004235198.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_004235198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245529

.
sly-r.6
for
101245529

.
sly-u.5
for
101264998

.
ath-u.5
for
AT5G61970

.
gma-u.5
for
100816486

.
gma-u.5
for
100777159

.
vvi-u.5
for
100262919

.
ppo-u.5
for
7457578

.
ppo-u.5
for
7454597

.
mtr-u.5
for
11442989

.
osa-u.5
for
4345269

.
zma-u.5
for
100192526

.


Ortholog ID: 6389
Species ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G61970 LOC100816486 LOC100777159 LOC101245529 LOC101264998 LOC4345269 LOC100192526 LOC103874634 LOC103854968 LOC100262919 LOC7457578 LOC7454597 LOC11442989 LOC123103008 LOC123120216 LOC123452368 LOC121232022 LOC121219291 LOC125581581 LOC125594638 CHLRE_06g267100v5 LOC110433082 LOC102586149 LOC102600623 LOC102628161 LOC100830023 LOC107760293 LOC107810486
Function* signal recognition particle-related / SRP-like protein signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 uncharacterized LOC101245529 uncharacterized LOC101264998 uncharacterized LOC4345269 uncharacterized LOC100192526 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 signal recognition particle 68 kDa protein-like uncharacterized LOC7457578 uncharacterized LOC7454597 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68 signal recognition particle subunit SRP68-like signal recognition particle subunit SRP68-like uncharacterized protein signal recognition particle subunit SRP68 signal recognition particle subunit SRP68-like signal recognition particle subunit SRP68-like uncharacterized LOC102628161 signal recognition particle subunit SRP68 uncharacterized LOC107760293 uncharacterized LOC107810486
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 7
ath00510 N-Glycan biosynthesis 6
ath00513 Various types of N-glycan biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03013 Nucleocytoplasmic transport 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 5
sly01200 Carbon metabolism 5
sly00640 Propanoate metabolism 3
sly01210 2-Oxocarboxylic acid metabolism 3
sly01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 2
sly00513 Various types of N-glycan biosynthesis 2
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03060 Protein export 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03015 mRNA surveillance pathway 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu03050 Proteasome 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04142 Lysosome 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi03060 Protein export 2
ghi00061 Fatty acid biosynthesis 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi03060 Protein export 2
ghi00061 Fatty acid biosynthesis 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre03040 Spliceosome 3
cre03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
sbi03018 RNA degradation 2
sbi03060 Protein export 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03013 Nucleocytoplasmic transport 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 6
bdi03060 Protein export 4
bdi04145 Phagosome 3
bdi04142 Lysosome 2
bdi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
nta03060 Protein export 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836318 100816486 100777159 101245529 101264998 4345269 100192526 103874634 103854968 100262919 7457578 7454597 11442989 123103008 123120216 123452368 121232022 121219291 125581581 125594638 5721920 110433082 102586149 102600623 102628161 100830023 107760293 107810486
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