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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245749   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 sly-r.6   101245749   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 sly-m.5   101245749   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 sly-u.5   101251680   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 sot-r.1   102590984   serine/threonine protein phosphatase 2A regulatory subunit B''beta-like 
 sot-r.1   102584799   serine/threonine protein phosphatase 2A regulatory subunit B''beta-like 
 nta-r.1   107777963   putative serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 nta-r.1   107790195   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 nta-r.1   107831426   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 ath-u.5   AT5G28850   Calcium-binding EF-hand family protein 
 ath-u.5   AT5G28900   Calcium-binding EF-hand family protein 
 ath-u.5   AT5G44090   Calcium-binding EF-hand family protein 
 gma-u.5   100815724   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 gma-u.5   100807531   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 gma-u.5   100804366   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 bra-r.6   103837305   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 bra-r.6   103874595   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 bra-r.6   103844328   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 vvi-u.5   100250118   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 vvi-u.5   100246385   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 ppo-u.5   7479742   serine/threonine protein phosphatase 2A regulatory subunit B''alpha 
 ppo-u.5   7487707   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 ppo-u.5   7487186   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 mtr-u.5   11434607   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 mtr-u.5   11435115   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 mtr-u.5   11424481   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 ghi-r.1   107892744   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 ghi-r.1   107893188   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 ghi-r.1   107926821   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 bna-r.1   111200864   serine/threonine protein phosphatase 2A regulatory subunit B''beta-like 
 bna-r.1   111208610   probable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon 
 bna-r.1   111211540   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 cit-r.1   102625238   serine/threonine protein phosphatase 2A regulatory subunit B''beta-like 
 cit-r.1   102625679   serine/threonine protein phosphatase 2A regulatory subunit B''beta-like 
 osa-u.5   4328580   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 osa-u.5   4348893   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 zma-u.5   103643458   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 zma-u.5   103626168   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 zma-u.5   100384234   Serine/threonine protein phosphatase 2A regulatory subunit B''alpha 
 tae-r.2   123121281   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 tae-r.2   123045523   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 tae-r.2   123127196   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 hvu-r.1   123430999   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 hvu-r.1   123402277   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 sbi-r.1   8067423   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 sbi-r.1   8079450   serine/threonine protein phosphatase 2A regulatory subunit B''beta 
 bdi-r.1   100839320   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 bdi-r.1   100829304   probable serine/threonine protein phosphatase 2A regulatory subunit B''delta 
 cre-r.1   CHLRE_06g260600v5   uncharacterized protein 

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Top 50 coexpressed genes to 101245749 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245749 (sly-u.5 coexpression data)

CoexMap"101245749"


slyLOC101245749 | Entrez gene ID : 101245749      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 3 3 2 3 3 3 3 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03015 [list] [network] mRNA surveillance pathway (129 genes)
sly04382 [list] [network] Cornified envelope formation (35 genes)
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (131 genes)  IEA  
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (21 genes)  IEA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (58 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (241 genes)  IEA  
Protein NP_001334321.1 [sequence] [blastp]
XP_010319272.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for NP_001334321.1)
nucl 5,  cyto 4  (predict for XP_010319272.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001334321.1)
other 8  (predict for XP_010319272.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245749
sly-r.6
for
101245749
sly-m.5
for
101245749
sly-u.5
for
101251680
sot-r.1
for
102590984
sot-r.1
for
102584799
nta-r.1
for
107777963
nta-r.1
for
107790195
nta-r.1
for
107831426
ath-u.5
for
AT5G28850
ath-u.5
for
AT5G28900
ath-u.5
for
AT5G44090
gma-u.5
for
100815724
gma-u.5
for
100807531
gma-u.5
for
100804366
bra-r.6
for
103837305
bra-r.6
for
103874595
bra-r.6
for
103844328
vvi-u.5
for
100250118
vvi-u.5
for
100246385
ppo-u.5
for
7479742
ppo-u.5
for
7487707
ppo-u.5
for
7487186
mtr-u.5
for
11434607
mtr-u.5
for
11435115
mtr-u.5
for
11424481
ghi-r.1
for
107892744
ghi-r.1
for
107893188
ghi-r.1
for
107926821
bna-r.1
for
111200864
bna-r.1
for
111208610
bna-r.1
for
111211540
cit-r.1
for
102625238
cit-r.1
for
102625679
osa-u.5
for
4328580
osa-u.5
for
4348893
zma-u.5
for
103643458
zma-u.5
for
103626168
zma-u.5
for
100384234
tae-r.2
for
123121281
tae-r.2
for
123045523
tae-r.2
for
123127196
hvu-r.1
for
123430999
hvu-r.1
for
123402277
sbi-r.1
for
8067423
sbi-r.1
for
8079450
bdi-r.1
for
100839320
bdi-r.1
for
100829304
cre-r.1
for
CHLRE_06g260600v5


Ortholog ID: 1552
Species sly sly sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101245749 LOC101251680 LOC102590984 LOC102584799 LOC107777963 LOC107790195 LOC107831426 AT5G44090 AT1G03960 AT1G54450 LOC100807531 LOC100804366 LOC100799748 LOC103837305 LOC103874595 LOC103836595 LOC100250118 LOC100246385 LOC7479742 LOC7487186 LOC7476933 LOC11434607 LOC11435115 LOC11424481 LOC107892744 LOC107898148 LOC107897886 LOC111200864 LOC111211540 LOC106416287 LOC102625238 LOC102625679 LOC4328580 LOC4348893 LOC103643458 LOC103626168 LOC100279229 LOC123136794 LOC123144283 LOC123181066 LOC123430999 LOC123402277 LOC8067423 LOC8079450 LOC100839320 LOC100829304 CHLRE_06g260600v5
Function* serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta-like putative serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta Calcium-binding EF-hand family protein Calcium-binding EF hand family protein Calcium-binding EF-hand family protein probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''epsilon serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''alpha serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''alpha serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta-like serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta uncharacterized LOC100279229 probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta serine/threonine protein phosphatase 2A regulatory subunit B''beta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta probable serine/threonine protein phosphatase 2A regulatory subunit B''delta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 7
sot04382 Cornified envelope formation 6
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 3
sot04142 Lysosome 3
sot03008 Ribosome biogenesis in eukaryotes 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 4
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04070 Phosphatidylinositol signaling system 4
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
gma03015 mRNA surveillance pathway 4
gma03060 Protein export 3
gma04145 Phagosome 3
gma04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma04120 Ubiquitin mediated proteolysis 2
gma02010 ABC transporters 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04382 Cornified envelope formation 3
gma03015 mRNA surveillance pathway 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00190 Oxidative phosphorylation 6
bra00020 Citrate cycle (TCA cycle) 6
bra01210 2-Oxocarboxylic acid metabolism 4
bra01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 3
bra00750 Vitamin B6 metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi03015 mRNA surveillance pathway 2
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 4
ppo04382 Cornified envelope formation 4
ppo03013 Nucleocytoplasmic transport 2
ppo00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 6
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 4
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 4
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 8
mtr00510 N-Glycan biosynthesis 6
mtr00513 Various types of N-glycan biosynthesis 6
mtr04142 Lysosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04382 Cornified envelope formation 6
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04382 Cornified envelope formation 6
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03083 Polycomb repressive complex 4
bna03018 RNA degradation 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna03018 RNA degradation 5
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
bna00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 6
bna03015 mRNA surveillance pathway 2
bna04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 5
zma04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03008 Ribosome biogenesis in eukaryotes 2
zma03013 Nucleocytoplasmic transport 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae04382 Cornified envelope formation 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 4
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04382 Cornified envelope formation 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 4
sbi03013 Nucleocytoplasmic transport 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
cre03082 ATP-dependent chromatin remodeling 2
cre03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245749 101251680 102590984 102584799 107777963 107790195 107831426 834432 839361 841887 100807531 100804366 100799748 103837305 103874595 103836595 100250118 100246385 7479742 7487186 7476933 11434607 11435115 11424481 107892744 107898148 107897886 111200864 111211540 106416287 102625238 102625679 4328580 4348893 103643458 103626168 100279229 123136794 123144283 123181066 123430999 123402277 8067423 8079450 100839320 100829304 5722044
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