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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245956   large ribosomal subunit protein eL8y-like 
 sly-r.6   101245956   large ribosomal subunit protein eL8y-like 
 sly-u.5   101256978   large ribosomal subunit protein eL8z 
 sly-u.5   101268144   large ribosomal subunit protein eL8y 
 sly-u.5   101246256   large ribosomal subunit protein eL8y 
 sot-r.1   102577601   60S ribosomal protein L7A-like protein 
 sot-r.1   102579458   60S ribosomal protein L7a-2-like 
 sot-r.1   102582959   60S ribosomal protein L7a-1-like 
 nta-r.1   107760319   large ribosomal subunit protein eL8z 
 nta-r.1   107789676   large ribosomal subunit protein eL8y 
 nta-r.1   107809517   large ribosomal subunit protein eL8z 
 ath-u.5   AT2G47610   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 ath-u.5   AT3G62870   Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 
 gma-u.5   100792324   60S ribosomal protein L7a-2 
 gma-u.5   100797399   60S ribosomal protein L7a-like 
 gma-u.5   100819609   60S ribosomal protein L7a-1 
 bra-r.6   103866359   60S ribosomal protein L7a-1 
 bra-r.6   103858249   60S ribosomal protein L7a-1 
 bra-r.6   103842092   60S ribosomal protein L7a-2 
 vvi-u.5   100266932   60S ribosomal protein L7a-like 
 vvi-u.5   100255902   large ribosomal subunit protein eL8y 
 vvi-u.5   100246265   large ribosomal subunit protein eL8y 
 ppo-u.5   18097676   60S ribosomal protein L7a-2 
 ppo-u.5   7456252   60S ribosomal protein L7a-2 
 ppo-u.5   18097675   60S ribosomal protein L7a-2 
 mtr-u.5   25492826   60S ribosomal protein L7a-2 
 mtr-u.5   25497747   60S ribosomal protein L7a-2 
 ghi-r.1   107913442   60S ribosomal protein L7a-2 
 ghi-r.1   107912075   60S ribosomal protein L7a-2 
 ghi-r.1   107886226   60S ribosomal protein L7a-2 
 bna-r.1   125606884   60S ribosomal protein L7a-1 
 bna-r.1   106444885   60S ribosomal protein L7a-1-like 
 bna-r.1   106442443   60S ribosomal protein L7a-2-like 
 cit-r.1   102619360   60S ribosomal protein L7a-2 
 cit-r.1   102626082   60S ribosomal protein L7a-2 
 osa-u.5   RPL7A-1   60S ribosomal protein L7a-1-like 
 osa-u.5   4347522   60S ribosomal protein L7a-1-like 
 zma-u.5   100282418   60S ribosomal protein L7a-1 
 zma-u.5   100280746   60S ribosomal protein L7a 
 zma-u.5   100191190   60S ribosomal protein L7a-1 
 tae-r.2   123104319   60S ribosomal protein L7a-2 
 tae-r.2   123112590   60S ribosomal protein L7a-2 
 tae-r.2   123122084   60S ribosomal protein L7a-2 
 hvu-r.1   123399794   60S ribosomal protein L7a-2-like 
 hvu-r.1   123407569   60S ribosomal protein L7a-2 
 sbi-r.1   8054789   60S ribosomal protein L7a-1 
 sbi-r.1   8054791   60S ribosomal protein L7a-1 
 bdi-r.1   100845456   60S ribosomal protein L7a-1 
 bdi-r.1   100844931   60S ribosomal protein L7a-1 
 cre-r.1   CHLRE_12g529651v5   ribosomal protein L7a 

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Top 50 coexpressed genes to 101245956 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245956 (sly-u.5 coexpression data)

CoexMap"101245956"


slyLOC101245956 | Entrez gene ID : 101245956      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 3 3 2 3 3 3 3 2 3 3 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0000470 [list] [network] maturation of LSU-rRNA  (44 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (284 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004241894.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 1,  cysk_nucl 1,  chlo 1,  pero 1  (predict for XP_004241894.1)
Subcellular
localization
TargetP
other 6  (predict for XP_004241894.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245956
sly-r.6
for
101245956
sly-u.5
for
101256978
sly-u.5
for
101268144
sly-u.5
for
101246256
sot-r.1
for
102577601
sot-r.1
for
102579458
sot-r.1
for
102582959
nta-r.1
for
107760319
nta-r.1
for
107789676
nta-r.1
for
107809517
ath-u.5
for
AT2G47610
ath-u.5
for
AT3G62870
gma-u.5
for
100792324
gma-u.5
for
100797399
gma-u.5
for
100819609
bra-r.6
for
103866359
bra-r.6
for
103858249
bra-r.6
for
103842092
vvi-u.5
for
100266932
vvi-u.5
for
100255902
vvi-u.5
for
100246265
ppo-u.5
for
18097676
ppo-u.5
for
7456252
ppo-u.5
for
18097675
mtr-u.5
for
25492826
mtr-u.5
for
25497747
ghi-r.1
for
107913442
ghi-r.1
for
107912075
ghi-r.1
for
107886226
bna-r.1
for
125606884
bna-r.1
for
106444885
bna-r.1
for
106442443
cit-r.1
for
102619360
cit-r.1
for
102626082
osa-u.5
for
RPL7A-1
osa-u.5
for
4347522
zma-u.5
for
100282418
zma-u.5
for
100280746
zma-u.5
for
100191190
tae-r.2
for
123104319
tae-r.2
for
123112590
tae-r.2
for
123122084
hvu-r.1
for
123399794
hvu-r.1
for
123407569
sbi-r.1
for
8054789
sbi-r.1
for
8054791
bdi-r.1
for
100845456
bdi-r.1
for
100844931
cre-r.1
for
CHLRE_12g529651v5


Ortholog ID: 1499
Species sly sly sly sot sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101245956 LOC101256978 LOC101246256 LOC102577601 LOC102579458 LOC102582959 LOC107789676 LOC107820905 LOC107826327 AT2G47610 AT3G62870 LOC100792324 LOC100819609 LOC100775472 LOC103858249 LOC103842092 LOC103861515 LOC100266932 LOC100255902 LOC100246265 LOC18097676 LOC18097675 LOC25492826 LOC25497747 LOC107924240 LOC107939097 LOC107939841 LOC106444885 LOC106375805 LOC106420535 LOC102619360 LOC102626082 RPL7A-1 LOC4347522 LOC100282418 LOC100280746 LOC100191190 LOC123104319 LOC123151875 LOC123157335 LOC123399794 LOC123407569 LOC8054789 LOC8054791 LOC100845456 LOC100844931 CHLRE_12g529651v5
Function* large ribosomal subunit protein eL8y-like large ribosomal subunit protein eL8z large ribosomal subunit protein eL8y 60S ribosomal protein L7A-like protein 60S ribosomal protein L7a-2-like 60S ribosomal protein L7a-1-like large ribosomal subunit protein eL8y large ribosomal subunit protein eL8y large ribosomal subunit protein eL8y Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 60S ribosomal protein L7a-2 60S ribosomal protein L7a-1 60S ribosomal protein L7a-2 60S ribosomal protein L7a-1 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-like large ribosomal subunit protein eL8y large ribosomal subunit protein eL8y 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-1-like 60S ribosomal protein L7a-2-like 60S ribosomal protein L7a-2-like 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-1-like 60S ribosomal protein L7a-1-like 60S ribosomal protein L7a-1 60S ribosomal protein L7a 60S ribosomal protein L7a-1 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2 60S ribosomal protein L7a-2-like 60S ribosomal protein L7a-2 60S ribosomal protein L7a-1 60S ribosomal protein L7a-1 60S ribosomal protein L7a-1 60S ribosomal protein L7a-1 ribosomal protein L7a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245956 101256978 101246256 102577601 102579458 102582959 107789676 107820905 107826327 819374 825462 100792324 100819609 100775472 103858249 103842092 103861515 100266932 100255902 100246265 18097676 18097675 25492826 25497747 107924240 107939097 107939841 106444885 106375805 106420535 102619360 102626082 4345279 4347522 100282418 100280746 100191190 123104319 123151875 123157335 123399794 123407569 8054789 8054791 100845456 100844931 5722420
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