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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246157   protein GRAVITROPIC IN THE LIGHT 1 
 sly-r.6   101246157   protein GRAVITROPIC IN THE LIGHT 1 
 ath-u.5   AT3G14870   hypothetical protein (DUF641) 
 ath-u.5   AT1G53380   hypothetical protein (DUF641) 
 gma-u.5   100818091   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100810236   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100799419   protein GRAVITROPIC IN THE LIGHT 1 
 vvi-u.5   100255640   protein GRAVITROPIC IN THE LIGHT 1 
 ppo-u.5   7455935   protein GRAVITROPIC IN THE LIGHT 1 
 ppo-u.5   18095453   protein GRAVITROPIC IN THE LIGHT 1 
 mtr-u.5   11413374   protein GRAVITROPIC IN THE LIGHT 1 
 mtr-u.5   25501259   protein GRAVITROPIC IN THE LIGHT 1 

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Top 50 coexpressed genes to 101246157 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246157 (sly-u.5 coexpression data)

CoexMap"101246157"


slyLOC101246157 | Entrez gene ID : 101246157    
Species sly ath gma vvi ppo mtr cre ghi cit hvu bdi sot bra sbi osa tae nta zma bna
Paralog 2 2 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009959 [list] [network] negative gravitropism  (7 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (30 genes)  IEA  
GO CC
GO MF
Protein XP_004244284.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 1,  cysk_nucl 1  (predict for XP_004244284.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_004244284.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246157

.
sly-r.6
for
101246157

.
ath-u.5
for
AT3G14870

.
ath-u.5
for
AT1G53380

.
gma-u.5
for
100818091

.
gma-u.5
for
100810236

.
gma-u.5
for
100799419

.
vvi-u.5
for
100255640

.
ppo-u.5
for
7455935

.
ppo-u.5
for
18095453

.
mtr-u.5
for
11413374

.
mtr-u.5
for
25501259

.


Ortholog ID: 5509
Species ath ath gma gma sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna sot cit nta
Symbol AT1G53380 AT3G14870 LOC100795678 LOC100818091 LOC101246157 LOC103869980 LOC103832669 LOC100255640 LOC18095453 LOC7455935 LOC25501259 LOC11413374 LOC107895315 LOC107920517 LOC106451469 LOC106399251 LOC102583964 LOC102609393 LOC107800875
Function* hypothetical protein (DUF641) hypothetical protein (DUF641) protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 IRK-interacting protein-like protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 3
bra04517 IgSF CAM signaling 3
bra04814 Motor proteins 3
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra00290 Valine, leucine and isoleucine biosynthesis 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 4
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi00541 Biosynthesis of various nucleotide sugars 3
vvi00040 Pentose and glucuronate interconversions 2
vvi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta00230 Purine metabolism 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841774 820716 100795678 100818091 101246157 103869980 103832669 100255640 18095453 7455935 25501259 11413374 107895315 107920517 106451469 106399251 102583964 102609393 107800875
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