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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246687   uncharacterized LOC101246687 
 sly-r.6   101246687   uncharacterized LOC101246687 
 sly-m.5   101246687   uncharacterized LOC101246687 
 ath-u.5   AT1G22510   E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) 
 ath-u.5   AT1G72175   E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) 
 gma-u.5   100306204   uncharacterized LOC100306204 
 vvi-u.5   100247708   uncharacterized LOC100247708 
 ppo-u.5   18104389   uncharacterized LOC18104389 
 ppo-u.5   7455279   uncharacterized LOC7455279 
 mtr-u.5   11418365   E3 ubiquitin-protein ligase RNF170 
 mtr-u.5   11414140   E3 ubiquitin-protein ligase RNF170 
 osa-u.5   4334720   uncharacterized LOC4334720 
 zma-u.5   100193852   uncharacterized LOC100193852 

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Top 50 coexpressed genes to 101246687 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246687 (sly-u.5 coexpression data)

CoexMap"101246687"


slyLOC101246687 | Entrez gene ID : 101246687    
Species sly ath gma vvi ppo mtr osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 2 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
Protein XP_004250631.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  cyto 2,  plas 2,  cyto_plas 2  (predict for XP_004250631.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004250631.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246687

.
sly-r.6
for
101246687

.
sly-m.5
for
101246687

.
ath-u.5
for
AT1G22510

.
ath-u.5
for
AT1G72175

.
gma-u.5
for
100306204

.
vvi-u.5
for
100247708

.
ppo-u.5
for
18104389

.
ppo-u.5
for
7455279

.
mtr-u.5
for
11418365

.
mtr-u.5
for
11414140

.
osa-u.5
for
4334720

.
zma-u.5
for
100193852

.


Ortholog ID: 8252
Species ath ath gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G72175 AT1G22510 LOC100306204 LOC101246687 LOC4334720 LOC100193852 LOC103829327 LOC103831725 LOC100247708 LOC7455279 LOC18104389 LOC11414140 LOC11418365 LOC123087734 LOC123114197 LOC123394969 LOC107914051 LOC107959523 LOC106354197 LOC106373761 LOC8079656 LOC102578695 LOC102613940 LOC100826204 LOC107777507 LOC107828712
Function* E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) uncharacterized LOC100306204 uncharacterized LOC101246687 uncharacterized LOC4334720 uncharacterized LOC100193852 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 uncharacterized LOC100247708 uncharacterized LOC7455279 uncharacterized LOC18104389 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170-like E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170 E3 ubiquitin-protein ligase RNF170-like uncharacterized LOC102613940 E3 ubiquitin-protein ligase RNF170 uncharacterized LOC107777507 uncharacterized LOC107828712
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 4
mtr00910 Nitrogen metabolism 4
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 2
mtr00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 6
tae03272 Virion - Hepatitis viruses 5
tae04144 Endocytosis 5
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00053 Ascorbate and aldarate metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 7
ghi03083 Polycomb repressive complex 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03022 Basal transcription factors 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 7
ghi03083 Polycomb repressive complex 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03022 Basal transcription factors 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00650 Butanoate metabolism 5
bna00410 beta-Alanine metabolism 4
bna00430 Taurine and hypotaurine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00650 Butanoate metabolism 5
bna00410 beta-Alanine metabolism 4
bna00430 Taurine and hypotaurine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04145 Phagosome 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843549 838857 100306204 101246687 4334720 100193852 103829327 103831725 100247708 7455279 18104389 11414140 11418365 123087734 123114197 123394969 107914051 107959523 106354197 106373761 8079656 102578695 102613940 100826204 107777507 107828712
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