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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5  NF-YB6  nuclear factor Y, subunit B6 
 ath-u.5  LEC1  Histone superfamily protein 
 gma-u.5  LEC1-B  nuclear transcription factor Y subunit B-6-like 
 gma-u.5  LEC1-A  transcription factor LEC1-A 
 vvi-u.5  100855401  nuclear transcription factor Y subunit B-6 
 zma-u.5  103654015  nuclear transcription factor Y subunit B-2 
 zma-u.5  542498  leafy cotyledon 

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Top 50 coexpressed genes to NF-YB6 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NF-YB6 (ath-u.5 coexpression data)

CoexMap"101246718"


slyLOC101246718 | Entrez gene ID : 101246718
Species ath gma vvi zma sly sbi nta mtr osa cre cit bra ppo hvu bdi sot tae bna ghi
Paralog 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (493 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (30 genes)  IEA  
GO MF
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (25 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (125 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (282 genes)  IEA  
Protein XP_010320573.1 [sequence] [blastp]
Subcellular
localization
wolf
pero 4,  nucl 4,  cyto_nucl 2,  chlo 1,  extr 1  (predict for XP_010320573.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_010320573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ath-u.5
for
NF-YB6

.

ath-u.5
for
LEC1

.

gma-u.5
for
LEC1-B

.

gma-u.5
for
LEC1-A

.

vvi-u.5
for
100855401

.

zma-u.5
for
103654015

.

zma-u.5
for
542498

.


Ortholog ID: 3046
Species ath ath gma zma zma bra bra vvi ghi bna bna sot cit bdi
Symbol NF-YB6 LEC1 LEC1-B LOC542498 LOC103654015 LOC103839510 LOC103829359 LOC100855401 LOC121229421 LOC106418177 LOC106425624 LOC102592041 LOC102610438 LOC100830019
Function* nuclear factor Y, subunit B6 Histone superfamily protein nuclear transcription factor Y subunit B-6-like leafy cotyledon nuclear transcription factor Y subunit B-2 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-9 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-9-like nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-6 nuclear transcription factor Y subunit B-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834818 838800 100800011 542498 103654015 103839510 103829359 100855401 121229421 106418177 106425624 102592041 102610438 100830019
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