ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101247078	2-hydroxyisoflavanone dehydratase
sly-r.6	101247078	2-hydroxyisoflavanone dehydratase
sly-m.5	101247078	2-hydroxyisoflavanone dehydratase
sly-u.5	101255487	2-hydroxyisoflavanone dehydratase-like
sly-u.5	101255920	2-hydroxyisoflavanone dehydratase-like
sly-u.5	101256216	2-hydroxyisoflavanone dehydratase-like
sot-r.1	102578867	probable carboxylesterase 12
sot-r.1	102579197	probable carboxylesterase 7
sot-r.1	102586757	2-hydroxyisoflavanone dehydratase-like
nta-r.1	107795400	2-hydroxyisoflavanone dehydratase-like
ath-u.5	AT1G47480	alpha/beta-Hydrolases superfamily protein
ath-u.5	CXE5	carboxyesterase 5
ath-u.5	AT1G49650	alpha/beta-Hydrolases superfamily protein
gma-u.5	111043202	alpha/beta-hydrolases superfamily protein
gma-u.5	100801816	probable carboxylesterase 12
gma-u.5	100806608	probable carboxylesterase 12
bra-r.6	103872928	probable carboxylesterase 1
bra-r.6	103875402	probable carboxylesterase 7
bra-r.6	103874808	probable carboxylesterase 12
vvi-u.5	100267581	probable carboxylesterase 2
vvi-u.5	104879249	2-hydroxyisoflavanone dehydratase
vvi-u.5	100243547	probable carboxylesterase 12
ppo-u.5	18097806	probable carboxylesterase 12
ppo-u.5	18102116	2-hydroxyisoflavanone dehydratase
ppo-u.5	18102115	probable carboxylesterase 12
mtr-u.5	11444596	probable carboxylesterase 12
mtr-u.5	11441408	probable carboxylesterase 12
mtr-u.5	11440081	2-hydroxyisoflavanone dehydratase
ghi-r.1	107905552	probable carboxylesterase 2
ghi-r.1	107927987	probable carboxylesterase 12
bna-r.1	111212358	probable carboxylesterase 5
bna-r.1	106424987	probable carboxylesterase 5
bna-r.1	111198583	probable carboxylesterase 1
cit-r.1	102608261	probable carboxylesterase 12
osa-u.5	4340477	2-hydroxyisoflavanone dehydratase
osa-u.5	4347287	tuliposide A-converting enzyme b1, amyloplastic
osa-u.5	4345820	probable carboxylesterase 12
zma-u.5	100382162	uncharacterized LOC100382162
zma-u.5	100284217	gibberellin receptor GID1L2
tae-r.2	123116290	tuliposide A-converting enzyme 1, chloroplastic
tae-r.2	123121724	tuliposide A-converting enzyme b3, amyloplastic
tae-r.2	123120609	probable carboxylesterase 12
hvu-r.1	123398773	2-hydroxyisoflavanone dehydratase-like
hvu-r.1	123398778	probable carboxylesterase 12
hvu-r.1	123398781	tuliposide A-converting enzyme 1, chloroplastic-like
sbi-r.1	110432950	probable carboxylesterase 7
bdi-r.1	100823346	probable carboxylesterase 7
bdi-r.1	100832052	probable carboxylesterase 12
bdi-r.1	100831872	tuliposide A-converting enzyme 1, chloroplastic

Top 50 coexpressed genes to 101247078 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101247078 (sly-u.5 coexpression data)

CoexMap"101247078"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016787 [list] [network] hydrolase activity

(2944 genes)

IEA

Protein

XP_004248737.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 9, plas 1, golg 1, golg_plas 1

(predict for XP_004248737.1)

Subcellular
localization
TargetP

other 8

(predict for XP_004248737.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101247078	sly-r.6 for 101247078	sly-m.5 for 101247078	sly-u.5 for 101255487	sly-u.5 for 101255920	sly-u.5 for 101256216	sot-r.1 for 102578867	sot-r.1 for 102579197	sot-r.1 for 102586757	nta-r.1 for 107795400	ath-u.5 for AT1G47480	ath-u.5 for CXE5	ath-u.5 for AT1G49650	gma-u.5 for 111043202	gma-u.5 for 100801816	gma-u.5 for 100806608	bra-r.6 for 103872928	bra-r.6 for 103875402	bra-r.6 for 103874808	vvi-u.5 for 100267581	vvi-u.5 for 104879249	vvi-u.5 for 100243547	ppo-u.5 for 18097806	ppo-u.5 for 18102116	ppo-u.5 for 18102115	mtr-u.5 for 11444596	mtr-u.5 for 11441408	mtr-u.5 for 11440081	ghi-r.1 for 107905552	ghi-r.1 for 107927987	bna-r.1 for 111212358	bna-r.1 for 106424987	bna-r.1 for 111198583	cit-r.1 for 102608261	osa-u.5 for 4340477	osa-u.5 for 4347287	osa-u.5 for 4345820	zma-u.5 for 100382162	zma-u.5 for 100284217	tae-r.2 for 123116290	tae-r.2 for 123121724	tae-r.2 for 123120609	hvu-r.1 for 123398773	hvu-r.1 for 123398778	hvu-r.1 for 123398781	sbi-r.1 for 110432950	bdi-r.1 for 100823346	bdi-r.1 for 100832052	bdi-r.1 for 100831872

Ortholog

Ortholog ID: 53

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

bdi

Symbol

ASH1

Function^*

2-hydroxyisoflavanone dehydratase-like

acylsugar acylhydrolase 1

probable carboxylesterase 13

probable carboxylesterase 7

2-hydroxyisoflavanone dehydratase-like

putative carboxylesterase 12

uncharacterized LOC107787780

putative carboxylesterase 2

alpha/beta-Hydrolases superfamily protein

probable carboxylesterase 12

probable carboxylesterase 2

2-hydroxyisoflavanone dehydratase

probable carboxylesterase 7

probable carboxylesterase 12

probable carboxylesterase 4, mitochondrial

probable carboxylesterase 2

uncharacterized LOC100247056

probable carboxylesterase 12

probable carboxylesterase 7

probable carboxylesterase 2

probable carboxylesterase 12

2-hydroxyisoflavanone dehydratase

probable carboxylesterase 2

probable carboxylesterase 12

probable carboxylesterase 3

probable carboxylesterase 12

2-hydroxyisoflavanone dehydratase-like

probable carboxylesterase 5

2-hydroxyisoflavanone dehydratase

tuliposide A-converting enzyme b1, amyloplastic

probable carboxylesterase 7

gibberellin receptor GID1L2

probable carboxylesterase 2

tuliposide A-converting enzyme 1, chloroplastic

2-hydroxyisoflavanone dehydratase

probable carboxylesterase 2

tuliposide A-converting enzyme 1, chloroplastic-like

probable carboxylesterase 7

probable carboxylesterase 12

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot04144	Endocytosis	2
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
sot00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot04144	Endocytosis	2
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
sot00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta00450	Selenocompound metabolism	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	5
ath04981	Folate transport and metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	5
gma01200	Carbon metabolism	5
gma01230	Biosynthesis of amino acids	5
gma00910	Nitrogen metabolism	2
gma00943	Isoflavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	4
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	3
gma04141	Protein processing in endoplasmic reticulum	3
gma04145	Phagosome	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	3
bra00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	5
ppo00941	Flavonoid biosynthesis	3
ppo00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
ppo00270	Cysteine and methionine metabolism	2
ppo00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	2
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	3
mtr04981	Folate transport and metabolism	3
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00944	Flavone and flavonol biosynthesis	2
bna00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	2
osa00020	Citrate cycle (TCA cycle)	2
osa00620	Pyruvate metabolism	2
osa00785	Lipoic acid metabolism	2
osa01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	4
osa00710	Carbon fixation by Calvin cycle	3
osa01200	Carbon metabolism	3
osa00030	Pentose phosphate pathway	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	5
zma00710	Carbon fixation by Calvin cycle	4
zma01200	Carbon metabolism	4
zma00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04146	Peroxisome	3
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	3
hvu01230	Biosynthesis of amino acids	3
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04145	Phagosome	2
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2
bdi00970	Aminoacyl-tRNA biosynthesis	2
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

101256216

101253900

101248522

102580493

102579519

107809294

107787780

107776023

838502

814884

100801816

100815625

100785409

103875402

103874818

103832917

100245277

100247056

100262425

18102113

18104922

11441408

11437326

11425594

107905552

121225476

107942661

111212352

106405942

106374693

102610217

102631253

4347254

4347255

9270290

100272907

103647489

103647491

123116290

123116288

123104002

123402288

123452691

100823346

100832052

100823821

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Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	1	3	3	3	3	3	3	2	3	1	3	2	3	3	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101247078 (sly-u.5 coexpression data)

Top 50 enrichment test to 101247078 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**