ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	PSK3	putative phytosulfokines 6-like
sly-r.6	PSK3	putative phytosulfokines 6-like
sly-u.5	101262762	phytosulfokine precursor protein
sly-u.5	PSK1	putative phytosulfokine peptide
sot-r.1	102593302	putative phytosulfokines 6
sot-r.1	102598821	putative phytosulfokines 6
nta-r.1	107817409	putative phytosulfokines 6
nta-r.1	107795732	putative phytosulfokines 6
nta-r.1	107789071	putative phytosulfokines 6
ath-u.5	PSK3	PHYTOSULFOKINE 3 PRECURSOR
gma-u.5	100790518	putative phytosulfokines 6
gma-u.5	100781363	putative phytosulfokines 6
gma-u.5	PSK1	putative phytosulfokines 6-like
bra-r.6	103847364	phytosulfokines 5-like
vvi-u.5	100853778	putative phytosulfokines 6
vvi-u.5	100261833	putative phytosulfokines 6
ppo-u.5	7478620	putative phytosulfokines 6
ppo-u.5	18097988	putative phytosulfokines 6
mtr-u.5	25487513	putative phytosulfokines 6
mtr-u.5	25483890	phytosulfokines 2
ghi-r.1	107905360	putative phytosulfokines 6
ghi-r.1	107905361	putative phytosulfokines 6
ghi-r.1	107912787	putative phytosulfokines 6
bna-r.1	106376424	putative phytosulfokines 6
bna-r.1	106428561	putative phytosulfokines 6
bna-r.1	106430034	putative phytosulfokines 6
cit-r.1	102618886	putative phytosulfokines 6
cit-r.1	102611588	putative phytosulfokines 6
osa-u.5	4351500	phytosulfokines 5-like
osa-u.5	4349781	phytosulfokines 2-like
zma-u.5	100282380	phytosulfokines 2
zma-u.5	100284542	phytosulfokines 2
zma-u.5	100280602	phytosulfokines 5
tae-r.2	780672	phytosulfokines 2
tae-r.2	123120237	phytosulfokines 2
tae-r.2	123111189	phytosulfokines 5
hvu-r.1	123397663	phytosulfokines 2
sbi-r.1	8074879	phytosulfokines 2
sbi-r.1	8069316	phytosulfokines 5
bdi-r.1	100823012	phytosulfokines 2

Top 50 coexpressed genes to PSK3 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to PSK3 (sly-u.5 coexpression data)

CoexMap"101247397"

[Cytoscape]

Annotation

functional annotation

KEGG

sly04075 [list] [network] Plant hormone signal transduction (437 genes)

GO BP

GO:0008283 [list] [network] cell population proliferation

(5 genes)

IEA

GO CC

GO:0005576 [list] [network] extracellular region

(261 genes)

IEA

GO MF

GO:0008083 [list] [network] growth factor activity

(7 genes)

IEA

Protein

NP_001266262.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, E.R. 2, nucl 1, plas 1, extr 1, nucl_plas 1

(predict for NP_001266262.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_001266262.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for PSK3	sly-r.6 for PSK3	sly-u.5 for 101262762	sly-u.5 for PSK1	sot-r.1 for 102593302	sot-r.1 for 102598821	nta-r.1 for 107817409	nta-r.1 for 107795732	nta-r.1 for 107789071	ath-u.5 for PSK3	gma-u.5 for 100790518	gma-u.5 for 100781363	gma-u.5 for PSK1	bra-r.6 for 103847364	vvi-u.5 for 100853778	vvi-u.5 for 100261833	ppo-u.5 for 7478620	ppo-u.5 for 18097988	mtr-u.5 for 25487513	mtr-u.5 for 25483890	ghi-r.1 for 107905360	ghi-r.1 for 107905361	ghi-r.1 for 107912787	bna-r.1 for 106376424	bna-r.1 for 106428561	bna-r.1 for 106430034	cit-r.1 for 102618886	cit-r.1 for 102611588	osa-u.5 for 4351500	osa-u.5 for 4349781	zma-u.5 for 100282380	zma-u.5 for 100284542	zma-u.5 for 100280602	tae-r.2 for 780672	tae-r.2 for 123120237	tae-r.2 for 123111189	hvu-r.1 for 123397663	sbi-r.1 for 8074879	sbi-r.1 for 8069316	bdi-r.1 for 100823012

Ortholog

Ortholog ID: 3020

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

PSK3

PSK1

PSK3

PSK1

PSK3

Function^*

putative phytosulfokines 6-like

phytosulfokine precursor protein

putative phytosulfokine peptide

putative phytosulfokines 6

PHYTOSULFOKINE 3 PRECURSOR

putative phytosulfokines 6

putative phytosulfokines 6-like

putative phytosulfokine peptide

phytosulfokines 5-like

putative phytosulfokines 6

phytosulfokines 2

putative phytosulfokines 6

phytosulfokines 5-like

phytosulfokines 2-like

phytosulfokines 2

phytosulfokines 5

phytosulfokines 2

phytosulfokines 5

phytosulfokines 2

phytosulfokines 5

phytosulfokines 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	6
sot00750	Vitamin B6 metabolism	2
sot01240	Biosynthesis of cofactors	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04016	MAPK signaling pathway - plant	2
nta04626	Plant-pathogen interaction	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	4
ath04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2
ppo00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	4
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	4
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03060	Protein export	2
cit04141	Protein processing in endoplasmic reticulum	2
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	3
sbi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	4
bdi04517	IgSF CAM signaling	4
bdi04814	Motor proteins	4
bdi00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

101247397

101262762

100736498

102593302

102598821

107795732

107789071

823603

100781363

100797092

100306271

103847364

100853778

100261833

7478620

18097988

25487513

25483890

107905360

107905361

106428561

106430034

106372650

102618886

102611588

4351500

4349781

100282380

100284542

100280602

780672

123120237

123111189

123397663

8074879

8069316

100823012

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	1	3	1	2	2	2	3	3	2	2	3	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to PSK3 (sly-u.5 coexpression data)

Top 50 enrichment test to PSK3 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**