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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248235   uncharacterized LOC101248235 
 sot-r.1   102587801   tRNA-dihydrouridine(20/20a) synthase-like 
 sot-r.1   102587473   tRNA-dihydrouridine(20/20a) synthase-like 
 nta-r.1   107830269   uncharacterized LOC107830269 
 nta-r.1   107804416   uncharacterized LOC107804416 
 ath-u.5   AT3G63510   FMN-linked oxidoreductases superfamily protein 
 ath-u.5   AT5G47970   Aldolase-type TIM barrel family protein 
 gma-u.5   100808450   tRNA-dihydrouridine(20/20a) synthase 
 gma-u.5   100785422   tRNA-dihydrouridine(20/20a) synthase 
 gma-u.5   100779457   tRNA-dihydrouridine(20/20a) synthase 
 bra-r.6   103874921   tRNA-dihydrouridine(20/20a) synthase 
 bra-r.6   103831645   tRNA-dihydrouridine(20/20a) synthase 
 vvi-u.5   100248175   uncharacterized LOC100248175 
 ppo-u.5   7482287   uncharacterized LOC7482287 
 ppo-u.5   7480072   uncharacterized LOC7480072 
 mtr-u.5   25491953   tRNA-dihydrouridine(20/20a) synthase 
 mtr-u.5   11428385   tRNA-dihydrouridine(20/20a) synthase 
 ghi-r.1   107899250   tRNA-dihydrouridine(20/20a) synthase 
 ghi-r.1   107938347   tRNA-dihydrouridine(20/20a) synthase 
 ghi-r.1   107900753   tRNA-dihydrouridine(20/20a) synthase 
 bna-r.1   106354130   tRNA-dihydrouridine(20/20a) synthase 
 bna-r.1   106348961   tRNA-dihydrouridine(20/20a) synthase 
 bna-r.1   111198707   tRNA-dihydrouridine(20/20a) synthase-like 
 cit-r.1   102613387   uncharacterized LOC102613387 
 osa-u.5   4335364   uncharacterized LOC4335364 
 zma-u.5   100273106   uncharacterized LOC100273106 
 tae-r.2   123053011   tRNA-dihydrouridine(20/20a) synthase 
 tae-r.2   123045176   tRNA-dihydrouridine(20/20a) synthase 
 tae-r.2   123188925   tRNA-dihydrouridine(20/20a) synthase 
 hvu-r.1   123426401   tRNA-dihydrouridine(20/20a) synthase-like 
 sbi-r.1   8086466   tRNA-dihydrouridine(20/20a) synthase 
 bdi-r.1   100823232   tRNA-dihydrouridine(20/20a) synthase 
 cre-r.1   CHLRE_15g636896v5   uncharacterized protein 

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Top 50 coexpressed genes to 101248235 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248235 (sly-u.5 coexpression data)

CoexMap"101247957"


slyLOC101247957 | Entrez gene ID : 101247957      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 2 2 2 3 2 1 2 2 3 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002943 [list] [network] tRNA dihydrouridine synthesis  (4 genes)  IEA  
GO CC
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (7 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (141 genes)  IEA  
Protein NP_001316047.1 [sequence] [blastp]
XP_010324507.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 8,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._vacu 1  (predict for NP_001316047.1)
cyto 7,  mito 1,  vacu 1,  E.R. 1,  pero 1,  E.R._vacu 1  (predict for XP_010324507.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001316047.1)
other 5,  mito 3  (predict for XP_010324507.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248235
sot-r.1
for
102587801
sot-r.1
for
102587473
nta-r.1
for
107830269
nta-r.1
for
107804416
ath-u.5
for
AT3G63510
ath-u.5
for
AT5G47970
gma-u.5
for
100808450
gma-u.5
for
100785422
gma-u.5
for
100779457
bra-r.6
for
103874921
bra-r.6
for
103831645
vvi-u.5
for
100248175
ppo-u.5
for
7482287
ppo-u.5
for
7480072
mtr-u.5
for
25491953
mtr-u.5
for
11428385
ghi-r.1
for
107899250
ghi-r.1
for
107938347
ghi-r.1
for
107900753
bna-r.1
for
106354130
bna-r.1
for
106348961
bna-r.1
for
111198707
cit-r.1
for
102613387
osa-u.5
for
4335364
zma-u.5
for
100273106
tae-r.2
for
123053011
tae-r.2
for
123045176
tae-r.2
for
123188925
hvu-r.1
for
123426401
sbi-r.1
for
8086466
bdi-r.1
for
100823232
cre-r.1
for
CHLRE_15g636896v5


Ortholog ID: 6027
Species sly sot sot nta nta ath ath gma gma gma bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101248235 LOC102587801 LOC102587473 LOC107830269 LOC107804416 AT3G63510 AT5G47970 LOC100808450 LOC100785422 LOC100779457 LOC103874921 LOC103831645 LOC100248175 LOC7482287 LOC7480072 LOC25491953 LOC11428385 LOC107899250 LOC107938347 LOC107900753 LOC106354130 LOC106348961 LOC111198707 LOC102613387 LOC4335364 LOC100273106 LOC123053011 LOC123045176 LOC123188925 LOC123426401 LOC8086466 LOC100823232 CHLRE_15g636896v5
Function* uncharacterized LOC101248235 tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase-like uncharacterized LOC107830269 uncharacterized LOC107804416 FMN-linked oxidoreductases superfamily protein Aldolase-type TIM barrel family protein tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC100248175 uncharacterized LOC7482287 uncharacterized LOC7480072 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase-like uncharacterized LOC102613387 uncharacterized LOC4335364 uncharacterized LOC100273106 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 3
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae03018 RNA degradation 3
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 2
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101248235 102587801 102587473 107830269 107804416 825526 834848 100808450 100785422 100779457 103874921 103831645 100248175 7482287 7480072 25491953 11428385 107899250 107938347 107900753 106354130 106348961 111198707 102613387 4335364 100273106 123053011 123045176 123188925 123426401 8086466 100823232 5726167
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