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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480072   uncharacterized LOC7480072 
 ppo-r.4   7480072   uncharacterized LOC7480072 
 ppo-u.5   7482287   uncharacterized LOC7482287 
 gma-u.5   100808450   tRNA-dihydrouridine(20/20a) synthase 
 gma-u.5   100785422   tRNA-dihydrouridine(20/20a) synthase 
 gma-u.5   100779457   tRNA-dihydrouridine(20/20a) synthase 
 mtr-u.5   25491953   tRNA-dihydrouridine(20/20a) synthase 
 mtr-u.5   11428385   tRNA-dihydrouridine(20/20a) synthase 
 ath-u.5   AT3G63510   FMN-linked oxidoreductases superfamily protein 
 ath-u.5   AT5G47970   Aldolase-type TIM barrel family protein 
 vvi-u.5   100248175   uncharacterized LOC100248175 
 sly-u.5   101248235   uncharacterized LOC101248235 
 osa-u.5   4335364   uncharacterized LOC4335364 
 zma-u.5   100273106   uncharacterized LOC100273106 

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Top 50 coexpressed genes to 7480072 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480072 (ppo-u.5 coexpression data)

CoexMap"7480072"


ppoLOC7480072 | Entrez gene ID : 7480072    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 3 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002943 [list] [network] tRNA dihydrouridine synthesis  (2 genes)  IEA  
GO CC
GO MF
GO:0017150 [list] [network] tRNA dihydrouridine synthase activity  (4 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (187 genes)  IEA  
Protein XP_024454992.1 [sequence] [blastp]
XP_024454994.1 [sequence] [blastp]
XP_052309012.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  E.R. 1  (predict for XP_024454992.1)
cyto 5,  chlo 1,  pero 1,  nucl 1,  extr 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for XP_024454994.1)
cyto 5,  chlo 1,  pero 1,  nucl 1,  extr 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for XP_052309012.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_024454992.1)
other 7,  mito 3  (predict for XP_024454994.1)
other 7,  mito 3  (predict for XP_052309012.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480072

.
ppo-r.4
for
7480072

.
ppo-u.5
for
7482287

.
gma-u.5
for
100808450

.
gma-u.5
for
100785422

.
gma-u.5
for
100779457

.
mtr-u.5
for
25491953

.
mtr-u.5
for
11428385

.
ath-u.5
for
AT3G63510

.
ath-u.5
for
AT5G47970

.
vvi-u.5
for
100248175

.
sly-u.5
for
101248235

.
osa-u.5
for
4335364

.
zma-u.5
for
100273106

.


Ortholog ID: 6027
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G47970 AT3G63510 LOC100808450 LOC100785422 LOC101248235 LOC4335364 LOC100273106 LOC103831645 LOC103874921 LOC100248175 LOC7480072 LOC7482287 LOC11428385 LOC25491953 LOC123045176 LOC123188925 LOC123426401 LOC107938347 LOC107900753 LOC106348961 LOC106354130 CHLRE_15g636896v5 LOC8086466 LOC102587473 LOC102587801 LOC102613387 LOC100823232 LOC107804416 LOC107830269
Function* Aldolase-type TIM barrel family protein FMN-linked oxidoreductases superfamily protein tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC101248235 uncharacterized LOC4335364 uncharacterized LOC100273106 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC100248175 uncharacterized LOC7480072 uncharacterized LOC7482287 tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase uncharacterized protein tRNA-dihydrouridine(20/20a) synthase tRNA-dihydrouridine(20/20a) synthase-like tRNA-dihydrouridine(20/20a) synthase-like uncharacterized LOC102613387 tRNA-dihydrouridine(20/20a) synthase uncharacterized LOC107804416 uncharacterized LOC107830269
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 5
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00450 Selenocompound metabolism 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae03018 RNA degradation 3
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03018 RNA degradation 2
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 3
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834848 825526 100808450 100785422 101248235 4335364 100273106 103831645 103874921 100248175 7480072 7482287 11428385 25491953 123045176 123188925 123426401 107938347 107900753 106348961 106354130 5726167 8086466 102587473 102587801 102613387 100823232 107804416 107830269
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