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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248255   RHOMBOID-like protein 9, chloroplastic 
 sly-r.6   101248255   RHOMBOID-like protein 9, chloroplastic 
 ath-u.5   AT5G38510   Rhomboid-related intramembrane serine protease family protein 
 gma-u.5   100815930   RHOMBOID-like protein 9, chloroplastic 
 gma-u.5   100808799   RHOMBOID-like protein 9, chloroplastic 
 vvi-u.5   100256693   RHOMBOID-like protein 9, chloroplastic 
 ppo-u.5   18107394   RHOMBOID-like protein 9, chloroplastic 
 mtr-u.5   25479746   RHOMBOID-like protein 9, chloroplastic 
 osa-u.5   4329191   RHOMBOID-like protein 9, chloroplastic 
 zma-u.5   100275753   RHOMBOID-like protein 9 chloroplastic 

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Top 50 coexpressed genes to 101248255 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248255 (sly-u.5 coexpression data)

CoexMap"101248255"


slyLOC101248255 | Entrez gene ID : 101248255    
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (3085 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (132 genes)  IEA  
Protein XP_004232374.1 [sequence] [blastp]
XP_010316340.1 [sequence] [blastp]
XP_010316341.1 [sequence] [blastp]
XP_010316342.1 [sequence] [blastp]
XP_010316343.1 [sequence] [blastp]
XP_069150623.1 [sequence] [blastp]
XP_069150624.1 [sequence] [blastp]
XP_069150626.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_004232374.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_010316340.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_010316341.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_010316342.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_010316343.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_069150623.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_069150624.1)
plas 5,  vacu 3,  golg_plas 3,  E.R._plas 3  (predict for XP_069150626.1)
Subcellular
localization
TargetP
other 3  (predict for XP_004232374.1)
other 3  (predict for XP_010316340.1)
other 3  (predict for XP_010316341.1)
other 3  (predict for XP_010316342.1)
other 3  (predict for XP_010316343.1)
other 3  (predict for XP_069150623.1)
other 3  (predict for XP_069150624.1)
other 3  (predict for XP_069150626.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248255
sly-r.6
for
101248255
ath-u.5
for
AT5G38510
gma-u.5
for
100815930
gma-u.5
for
100808799
vvi-u.5
for
100256693
ppo-u.5
for
18107394
mtr-u.5
for
25479746
osa-u.5
for
4329191
zma-u.5
for
100275753


Ortholog ID: 11426
Species sly sot nta nta ath gma gma bra bra vvi ppo mtr ghi ghi bna bna cit osa zma sbi
Symbol LOC101248255 LOC102578851 LOC107768390 LOC107820731 AT5G38510 LOC100815930 LOC100808799 LOC103850116 LOC103863789 LOC100256693 LOC18107394 LOC25479746 LOC107912718 LOC107916728 LOC106352653 LOC106429455 LOC102618822 LOC4329191 LOC100275753 LOC8078338
Function* RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic Rhomboid-related intramembrane serine protease family protein RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9, chloroplastic RHOMBOID-like protein 9 chloroplastic RHOMBOID-like protein 9, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 12
sly00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 15
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta01240 Biosynthesis of cofactors 3
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 7
nta00860 Porphyrin metabolism 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath00670 One carbon pool by folate 2
ath00460 Cyanoamino acid metabolism 2
ath00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 10
gma00860 Porphyrin metabolism 4
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
bra00010 Glycolysis / Gluconeogenesis 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 6
vvi00195 Photosynthesis 4
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 8
ppo00860 Porphyrin metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 7
cit00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101248255 102578851 107768390 107820731 833839 100815930 100808799 103850116 103863789 100256693 18107394 25479746 107912718 107916728 106352653 106429455 102618822 4329191 100275753 8078338
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