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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248399   uncharacterized LOC101248399 
 sly-r.6   101248399   uncharacterized LOC101248399 
 sly-u.5   101250440   uncharacterized LOC101250440 
 ath-u.5   AT2G44410   RING/U-box superfamily protein 
 gma-u.5   100794016   RING finger and U-box domain-containing protein 
 gma-u.5   100793230   RING finger domain-containing protein 
 vvi-u.5   100246046   uncharacterized LOC100246046 
 ppo-u.5   18094990   uncharacterized LOC18094990 
 ppo-u.5   7489295   uncharacterized LOC7489295 
 mtr-u.5   25486843   uncharacterized LOC25486843 
 mtr-u.5   11432860   uncharacterized LOC11432860 

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Top 50 coexpressed genes to 101248399 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248399 (sly-u.5 coexpression data)

CoexMap"101248399"


slyLOC101248399 | Entrez gene ID : 101248399    
Species sly ath gma vvi ppo mtr cre ghi cit hvu bdi sot bra sbi osa tae nta zma bna
Paralog 3 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (283 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (509 genes)  IEA  
GO MF
GO:0044390 [list] [network] ubiquitin-like protein conjugating enzyme binding  (41 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
Protein XP_004240922.1 [sequence] [blastp]
XP_025887258.1 [sequence] [blastp]
XP_025887259.1 [sequence] [blastp]
XP_069155289.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_004240922.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_025887258.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_025887259.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_069155289.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_004240922.1)
other 6,  chlo 5  (predict for XP_025887258.1)
other 6,  chlo 5  (predict for XP_025887259.1)
other 6,  chlo 5  (predict for XP_069155289.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248399

.
sly-r.6
for
101248399

.
sly-u.5
for
101250440

.
ath-u.5
for
AT2G44410

.
gma-u.5
for
100794016

.
gma-u.5
for
100793230

.
vvi-u.5
for
100246046

.
ppo-u.5
for
18094990

.
ppo-u.5
for
7489295

.
mtr-u.5
for
25486843

.
mtr-u.5
for
11432860

.


Ortholog ID: 11277
Species ath gma gma sly sly bra vvi ppo ppo mtr mtr bna bna sot sot cit nta nta
Symbol AT2G44410 LOC100793230 LOC100794016 LOC101250440 LOC101248399 LOC103866792 LOC100246046 LOC7489295 LOC18094990 LOC11432860 LOC25486843 LOC106396562 LOC106396412 LOC102579795 LOC102598553 LOC102624790 LOC107819064 LOC107831866
Function* RING/U-box superfamily protein RING finger domain-containing protein RING finger and U-box domain-containing protein uncharacterized LOC101250440 uncharacterized LOC101248399 uncharacterized LOC103866792 uncharacterized LOC100246046 uncharacterized LOC7489295 uncharacterized LOC18094990 uncharacterized LOC11432860 uncharacterized LOC25486843 uncharacterized LOC106396562 uncharacterized LOC106396412 uncharacterized LOC102579795 uncharacterized LOC102598553 uncharacterized LOC102624790 uncharacterized LOC107819064 uncharacterized LOC107831866
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath04712 Circadian rhythm - plant 3
ath04130 SNARE interactions in vesicular transport 2
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
sly00020 Citrate cycle (TCA cycle) 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 8
sly03060 Protein export 5
sly04145 Phagosome 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819048 100793230 100794016 101250440 101248399 103866792 100246046 7489295 18094990 11432860 25486843 106396562 106396412 102579795 102598553 102624790 107819064 107831866
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