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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249224   two-component response regulator-like PRR73 
 sly-r.6   101249224   two-component response regulator-like PRR73 
 sly-u.5   101254785   two-component response regulator-like PRR37 
 ath-u.5   PRR7   pseudo-response regulator 7 
 gma-u.5   PRR3A   two-component response regulator PRR3A 
 gma-u.5   100796933   two-component response regulator-like APRR7 
 gma-u.5   PRR3B   two-component response regulator PRR3B 
 vvi-u.5   100256937   two-component response regulator-like PRR37 
 vvi-u.5   100246836   two-component response regulator-like PRR37 
 ppo-u.5   7469780   two-component response regulator-like PRR73 
 ppo-u.5   7458626   two-component response regulator-like PRR37 
 mtr-u.5   25484061   two-component response regulator-like APRR7 
 mtr-u.5   11412120   two-component response regulator-like APRR3 
 osa-u.5   4332464   two-component response regulator-like PRR73 
 osa-u.5   4344399   two-component response regulator-like PRR37 
 zma-u.5   100280240   PseuodARR-B transcription factor 
 zma-u.5   103633607   two-component response regulator-like PRR37 
 zma-u.5   103647963   two-component response regulator-like PRR37 

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Top 50 coexpressed genes to 101249224 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249224 (sly-u.5 coexpression data)

CoexMap"101249224"


slyLOC101249224 | Entrez gene ID : 101249224    
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 3 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04712 [list] [network] Circadian rhythm - plant (47 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (32 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (106 genes)  IEA  
GO CC
GO MF
Protein XP_004249579.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  cysk_nucl 1,  plas 1,  extr 1,  E.R. 1,  E.R._plas 1,  chlo 1,  cyto 1,  mito 1,  vacu 1,  chlo_mito 1,  golg_plas 1  (predict for XP_004249579.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004249579.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249224
sly-r.6
for
101249224
sly-u.5
for
101254785
ath-u.5
for
PRR7
gma-u.5
for
PRR3A
gma-u.5
for
100796933
gma-u.5
for
PRR3B
vvi-u.5
for
100256937
vvi-u.5
for
100246836
ppo-u.5
for
7469780
ppo-u.5
for
7458626
mtr-u.5
for
25484061
mtr-u.5
for
11412120
osa-u.5
for
4332464
osa-u.5
for
4344399
zma-u.5
for
100280240
zma-u.5
for
103633607
zma-u.5
for
103647963


Ortholog ID: 3143
Species sly sly sot sot nta nta ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC101254785 LOC101249224 LOC102590489 LOC102583251 LOC107759873 LOC107783525 PRR7 LOC100796933 LOC100806454 LOC103847424 LOC103850461 LOC100246836 LOC7458626 LOC7469780 LOC25484061 LOC11412120 LOC121210129 LOC107959066 LOC106399293 LOC106450520 LOC102616594 LOC102610014 LOC4344399 LOC4332464 LOC100280240 LOC103633607 LOC123092509 LOC123051362 LOC123424581 LOC123448955 LOC8084889 LOC8070845 LOC100840348 LOC100838360
Function* two-component response regulator-like PRR37 two-component response regulator-like PRR73 two-component response regulator-like APRR7 two-component response regulator-like PRR37 two-component response regulator-like APRR7 two-component response regulator-like PRR37 pseudo-response regulator 7 two-component response regulator-like APRR7 two-component response regulator-like APRR7 two-component response regulator-like APRR7 two-component response regulator-like APRR7 two-component response regulator-like PRR37 two-component response regulator-like PRR37 two-component response regulator-like PRR73 two-component response regulator-like APRR7 two-component response regulator-like APRR3 two-component response regulator-like APRR7 two-component response regulator-like APRR3 two-component response regulator-like APRR7 two-component response regulator-like APRR7 two-component response regulator-like APRR7 two-component response regulator-like APRR7 two-component response regulator-like PRR37 two-component response regulator-like PRR73 PseuodARR-B transcription factor two-component response regulator-like PRR37 two-component response regulator-like PRR73 two-component response regulator-like PRR37 two-component response regulator-like PRR37 two-component response regulator-like PRR73 two-component response regulator-like PRR73 two-component response regulator-like PRR37 two-component response regulator-like PRR73 two-component response regulator-like PRR37
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 5
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 8
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 6
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 9
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 6
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 10
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 7
bna04141 Protein processing in endoplasmic reticulum 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
osa00380 Tryptophan metabolism 2
osa01240 Biosynthesis of cofactors 2
osa00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101254785 101249224 102590489 102583251 107759873 107783525 831793 100796933 100806454 103847424 103850461 100246836 7458626 7469780 25484061 11412120 121210129 107959066 106399293 106450520 102616594 102610014 4344399 4332464 100280240 103633607 123092509 123051362 123424581 123448955 8084889 8070845 100840348 100838360
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