ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101249249	21 kDa protein
sly-r.6	101249249	21 kDa protein
sly-m.5	101249249	21 kDa protein
sly-u.5	101248367	21 kDa protein
sly-u.5	101248653	21 kDa protein
sot-r.1	107059126	21 kDa protein-like
sot-r.1	102585635	21 kDa protein-like
sot-r.1	102581529	21 kDa protein-like
nta-r.1	107765730	21 kDa protein-like
nta-r.1	107765731	21 kDa protein-like
ath-u.5	AT3G47380	Plant invertase/pectin methylesterase inhibitor superfamily protein
ath-u.5	AT1G62770	Plant invertase/pectin methylesterase inhibitor superfamily protein
ath-u.5	AT5G62360	Plant invertase/pectin methylesterase inhibitor superfamily protein
gma-u.5	100305537	plant invertase/pectin methylesterase inhibitor-domain containing protein
gma-u.5	100776636	unchaharecterized LOC100776636
gma-u.5	100305900	plant invertase/pectin methylesterase inhibitor superfamily protein
bra-r.6	103854999	pectinesterase inhibitor 11-like
bra-r.6	103861541	pectinesterase inhibitor 7
vvi-u.5	100260301	21 kDa protein
vvi-u.5	GRIP28	ripening-related protein-like
vvi-u.5	100243664	21 kDa protein-like
ppo-u.5	7479222	21 kDa protein
ppo-u.5	7476747	21 kDa protein
mtr-u.5	11420312	21 kDa protein
mtr-u.5	25491836	21 kDa protein
mtr-u.5	25491837	21 kDa protein
ghi-r.1	107944491	21 kDa protein
ghi-r.1	107886165	21 kDa protein
ghi-r.1	107896509	21 kDa protein
bna-r.1	106436652	pectinesterase inhibitor 9
cit-r.1	107178591	21 kDa protein-like
cit-r.1	102624882	21 kDa protein-like
cit-r.1	102622808	21 kDa protein
osa-u.5	4342040	21 kDa protein
zma-u.5	100381320	ripening-related protein
zma-u.5	100283824	uncharacterized LOC100283824
tae-r.2	123148505	21 kDa protein
tae-r.2	123168755	21 kDa protein
tae-r.2	123157183	21 kDa protein
hvu-r.1	123412324	21 kDa protein-like
sbi-r.1	8065610	21 kDa protein
sbi-r.1	110430834	21 kDa protein-like
bdi-r.1	100832312	21 kDa protein

Top 50 coexpressed genes to 101249249 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101249249 (sly-u.5 coexpression data)

CoexMap"101249249"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0043086 [list] [network] negative regulation of catalytic activity

(35 genes)

IEA

GO CC

GO MF

GO:0004857 [list] [network] enzyme inhibitor activity

(196 genes)

IEA

Protein

XP_004234937.2 [sequence] [blastp]

Subcellular
localization
wolf

extr 6, mito 1, plas 1, E.R._plas 1, nucl 1, vacu 1, chlo_mito 1, cyto_mito 1

(predict for XP_004234937.2)

Subcellular
localization
TargetP

scret 9

(predict for XP_004234937.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101249249	sly-r.6 for 101249249	sly-m.5 for 101249249	sly-u.5 for 101248367	sly-u.5 for 101248653	sot-r.1 for 107059126	sot-r.1 for 102585635	sot-r.1 for 102581529	nta-r.1 for 107765730	nta-r.1 for 107765731	ath-u.5 for AT3G47380	ath-u.5 for AT1G62770	ath-u.5 for AT5G62360	gma-u.5 for 100305537	gma-u.5 for 100776636	gma-u.5 for 100305900	bra-r.6 for 103854999	bra-r.6 for 103861541	vvi-u.5 for 100260301	vvi-u.5 for GRIP28	vvi-u.5 for 100243664	ppo-u.5 for 7479222	ppo-u.5 for 7476747	mtr-u.5 for 11420312	mtr-u.5 for 25491836	mtr-u.5 for 25491837	ghi-r.1 for 107944491	ghi-r.1 for 107886165	ghi-r.1 for 107896509	bna-r.1 for 106436652	cit-r.1 for 107178591	cit-r.1 for 102624882	cit-r.1 for 102622808	osa-u.5 for 4342040	zma-u.5 for 100381320	zma-u.5 for 100283824	tae-r.2 for 123148505	tae-r.2 for 123168755	tae-r.2 for 123157183	hvu-r.1 for 123412324	sbi-r.1 for 8065610	sbi-r.1 for 110430834	bdi-r.1 for 100832312

Ortholog

Ortholog ID: 480

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

GRIP28

Function^*

21 kDa protein

21 kDa protein-like

pectinesterase inhibitor 9-like

Plant invertase/pectin methylesterase inhibitor superfamily protein

plant invertase/pectin methylesterase inhibitor domain-containing protein

21 kDa protein

pectinesterase inhibitor 7

pectinesterase inhibitor 11

ripening-related protein-like

21 kDa protein

pectinesterase inhibitor 11-like

21 kDa protein-like

21 kDa protein

ripening-related protein

uncharacterized LOC100283824

21 kDa protein

21 kDa protein-like

21 kDa protein

21 kDa protein-like

21 kDa protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	4
nta00670	One carbon pool by folate	4
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath04075	Plant hormone signal transduction	4
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01240	Biosynthesis of cofactors	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
vvi01240	Biosynthesis of cofactors	2
vvi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr00460	Cyanoamino acid metabolism	2
mtr00500	Starch and sucrose metabolism	2
mtr00999	Biosynthesis of various plant secondary metabolites	2
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00053	Ascorbate and aldarate metabolism	2
ghi00071	Fatty acid degradation	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00053	Ascorbate and aldarate metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01240	Biosynthesis of cofactors	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00053	Ascorbate and aldarate metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01240	Biosynthesis of cofactors	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00053	Ascorbate and aldarate metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01240	Biosynthesis of cofactors	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

101248367

101248653

102585635

102581529

102595614

107785790

107808283

107801092

842576

836357

836356

100527116

100802601

103861541

103874669

100232884

100251832

7476747

7476748

7476749

25491836

112421176

11427094

107944491

107918594

107895109

111213079

106347793

106347791

107178591

102622808

4342040

100381320

100283824

123148505

123168755

123157183

123412324

8065610

110430834

100832312

The preparation time of this page was 0.4 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	3	3	2	3	2	3	3	1	3	1	2	3	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101249249 (sly-u.5 coexpression data)

Top 50 enrichment test to 101249249 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**