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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249315   protein FAR1-RELATED SEQUENCE 7-like 
 sly-r.6   101249315   protein FAR1-RELATED SEQUENCE 7-like 
 sot-r.1   102579673   protein FAR1-RELATED SEQUENCE 12-like 
 nta-r.1   107767048   protein FAR1-RELATED SEQUENCE 7-like 
 nta-r.1   107807322   protein FAR1-RELATED SEQUENCE 7 
 ath-u.5   FRS7   FAR1-related sequence 7 
 ath-u.5   FRS12   FAR1-related sequence 12 
 gma-u.5   100816656   protein FAR1-RELATED SEQUENCE 7 
 gma-u.5   100780519   protein FAR1-RELATED SEQUENCE 7 
 bra-r.6   103856355   protein FAR1-RELATED SEQUENCE 12 
 vvi-u.5   100245967   protein FAR1-RELATED SEQUENCE 7 
 ppo-u.5   18102315   protein FAR1-RELATED SEQUENCE 7 
 ppo-u.5   7469105   protein FAR1-RELATED SEQUENCE 7 
 mtr-u.5   112419201   protein FAR1-RELATED SEQUENCE 12 
 ghi-r.1   121221050   protein FAR1-RELATED SEQUENCE 7 
 ghi-r.1   107929119   protein FAR1-RELATED SEQUENCE 7 
 bna-r.1   106434122   protein FAR1-RELATED SEQUENCE 12 
 bna-r.1   106386792   protein FAR1-RELATED SEQUENCE 12 
 cit-r.1   102608081   protein FAR1-RELATED SEQUENCE 7 

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Top 50 coexpressed genes to 101249315 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249315 (sly-u.5 coexpression data)

CoexMap"101249315"


slyLOC101249315 | Entrez gene ID : 101249315      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit tae zma bdi osa sbi hvu cre
Paralog 2 1 2 2 2 1 1 2 1 2 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein XP_004249494.1 [sequence] [blastp]
XP_010312262.1 [sequence] [blastp]
XP_019071660.1 [sequence] [blastp]
XP_069146642.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 1,  cyto 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_004249494.1)
nucl 4,  chlo 1,  cyto 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_010312262.1)
nucl 4,  chlo 1,  cyto 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_019071660.1)
nucl 4,  chlo 1,  cyto 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_069146642.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004249494.1)
other 8  (predict for XP_010312262.1)
other 8  (predict for XP_019071660.1)
other 8  (predict for XP_069146642.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249315
sly-r.6
for
101249315
sot-r.1
for
102579673
nta-r.1
for
107767048
nta-r.1
for
107807322
ath-u.5
for
FRS7
ath-u.5
for
FRS12
gma-u.5
for
100816656
gma-u.5
for
100780519
bra-r.6
for
103856355
vvi-u.5
for
100245967
ppo-u.5
for
18102315
ppo-u.5
for
7469105
mtr-u.5
for
112419201
ghi-r.1
for
121221050
ghi-r.1
for
107929119
bna-r.1
for
106434122
bna-r.1
for
106386792
cit-r.1
for
102608081


Ortholog ID: 12424
Species sly sot nta nta ath ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit
Symbol LOC101249315 LOC102579673 LOC107767048 LOC107807322 FRS7 FRS12 LOC100816656 LOC100780519 LOC103856355 LOC100245967 LOC18102315 LOC7469105 LOC112419201 LOC121221050 LOC107929119 LOC106434122 LOC106386792 LOC102608081
Function* protein FAR1-RELATED SEQUENCE 7-like protein FAR1-RELATED SEQUENCE 12-like protein FAR1-RELATED SEQUENCE 7-like protein FAR1-RELATED SEQUENCE 7 FAR1-related sequence 7 FAR1-related sequence 12 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 7 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 3
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101249315 102579673 107767048 107807322 819799 832014 100816656 100780519 103856355 100245967 18102315 7469105 112419201 121221050 107929119 106434122 106386792 102608081
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