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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101249762   WD repeat-containing protein GTS1 
 sly-r.6   101249762   WD repeat-containing protein GTS1 
 ath-u.5   AT2G47790   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100794786   WD repeat-containing protein 89 homolog 
 gma-u.5   100787377   WD repeat-containing protein GTS1 
 vvi-u.5   100264020   WD repeat-containing protein GTS1 
 ppo-u.5   7478837   WD repeat-containing protein GTS1 
 ppo-u.5   7457942   WD repeat-containing protein GTS1 
 mtr-u.5   11420988   WD repeat-containing protein GTS1 
 osa-u.5   4352026   WD repeat-containing protein GTS1 
 zma-u.5   100217313   Transducin/WD40 repeat-like superfamily protein 

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Top 50 coexpressed genes to 101249762 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101249762 (sly-u.5 coexpression data)

CoexMap"101249762"


slyLOC101249762 | Entrez gene ID : 101249762      
Species sly ath gma vvi ppo mtr osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 2 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004247429.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  extr 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_004247429.2)
Subcellular
localization
TargetP
other 9  (predict for XP_004247429.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101249762

.
sly-r.6
for
101249762

.
ath-u.5
for
AT2G47790

.
gma-u.5
for
100794786

.
gma-u.5
for
100787377

.
vvi-u.5
for
100264020

.
ppo-u.5
for
7478837

.
ppo-u.5
for
7457942

.
mtr-u.5
for
11420988

.
osa-u.5
for
4352026

.
zma-u.5
for
100217313

.


Ortholog ID: 8922
Species ath gma gma sly osa zma vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G47790 LOC100794786 LOC100787377 LOC101249762 LOC4352026 LOC100217313 LOC100264020 LOC7478837 LOC7457942 LOC11420988 LOC123088664 LOC123152004 LOC123411174 LOC107931235 LOC107946084 LOC111199019 LOC106392315 CHLRE_03g178050v5 LOC8060143 LOC102595934 LOC102621572 LOC100843015 LOC107786599 LOC107787639
Function* Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 89 homolog WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 uncharacterized protein WD repeat-containing protein 89 homolog WD repeat-containing protein 89 homolog WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1 WD repeat-containing protein GTS1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 2
tae00410 beta-Alanine metabolism 2
tae00592 alpha-Linolenic acid metabolism 2
tae00640 Propanoate metabolism 2
tae01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 6
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03008 Ribosome biogenesis in eukaryotes 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00190 Oxidative phosphorylation 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00190 Oxidative phosphorylation 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819391 100794786 100787377 101249762 4352026 100217313 100264020 7478837 7457942 11420988 123088664 123152004 123411174 107931235 107946084 111199019 106392315 66052882 8060143 102595934 102621572 100843015 107786599 107787639
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