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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250639   ras-related protein RABA2a 
 sly-r.6   101250639   ras-related protein RABA2a 
 sly-m.5   101250639   ras-related protein RABA2a 
 sly-u.5   101268402   ras-related protein Rab11A 
 ath-u.5   RABA2c   RAB GTPase homolog A2C 
 ath-u.5   RABA2D   RAB GTPase homolog A2D 
 ath-u.5   RABA2b   RAB GTPase homolog A2B 
 gma-u.5   100816268   ras-related protein Rab11C 
 vvi-u.5   100259150   ras-related protein RABA2a 
 vvi-u.5   100253476   ras-related protein Rab2BV-like 
 ppo-u.5   18106002   ras-related protein Rab11C 
 ppo-u.5   7489179   ras-related protein Rab11C 
 mtr-u.5   11425116   ras-related protein RABA2a 
 mtr-u.5   25492545   ras-related protein Rab11C 
 osa-u.5   4338288   ras-related protein RGP2-like 
 osa-u.5   4337555   ras-related protein RABA2a 
 osa-u.5   4334746   ras-related protein RABA2a 
 zma-u.5   100280532   uncharacterized LOC100280532 
 zma-u.5   100283324   ras-related protein Rab11C 
 zma-u.5   100216670   Ras-related protein RABA2c 

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Top 50 coexpressed genes to 101250639 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250639 (sly-u.5 coexpression data)

CoexMap"101250639"


slyLOC101250639 | Entrez gene ID : 101250639      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 3 1 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04144 [list] [network] Endocytosis (167 genes)
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (469 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (168 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (208 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (239 genes)  IEA  
Protein XP_004248818.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_004248818.1)
Subcellular
localization
TargetP
other 7  (predict for XP_004248818.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250639

.
sly-r.6
for
101250639

.
sly-m.5
for
101250639

.
sly-u.5
for
101268402

.
ath-u.5
for
RABA2c

.
ath-u.5
for
RABA2D

.
ath-u.5
for
RABA2b

.
gma-u.5
for
100816268

.
vvi-u.5
for
100259150

.
vvi-u.5
for
100253476

.
ppo-u.5
for
18106002

.
ppo-u.5
for
7489179

.
mtr-u.5
for
11425116

.
mtr-u.5
for
25492545

.
osa-u.5
for
4338288

.
osa-u.5
for
4337555

.
osa-u.5
for
4334746

.
zma-u.5
for
100280532

.
zma-u.5
for
100283324

.
zma-u.5
for
100216670

.


Ortholog ID: 577
Species ath ath gma osa osa zma zma bra bra vvi ppo mtr mtr tae hvu hvu ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RABA2c RAB11c LOC100499980 LOC4334619 LOC4338288 LOC100193335 LOC100216670 LOC103873290 LOC103836445 LOC100253476 LOC18106002 LOC25492545 LOC11425116 LOC123123750 LOC123426386 LOC123428721 LOC107906582 LOC106433281 LOC106346261 CHLRE_03g189250v5 LOC8066597 LOC110431783 LOC102604566 LOC102591603 LOC102612243 LOC102613896 LOC100836616 LOC100839494 LOC107830561 LOC107814193
Function* RAB GTPase homolog A2C RAB GTPase 11C putative ras-related protein RABA2a ras-related protein Rab11C ras-related protein RGP2-like Ras protein Rab11A Ras-related protein RABA2c ras-related protein RABA2c ras-related protein RABA2b ras-related protein Rab2BV-like ras-related protein Rab11C ras-related protein Rab11C ras-related protein RABA2a ras-related protein RABA2a ras-related protein RABA2a-like ras-related protein RGP2 ras-related protein Rab11C ras-related protein RABA2d ras-related protein RABA2a-like uncharacterized protein ras-related protein RABA2a ras-related protein Rab11C ras-related protein RABA2a-like ras-related protein Rab2BV ras-related protein RABA2a ras-related protein Rab2BV ras-related protein RABA2a ras-related protein Rab11C ras-related protein Rab11C-like ras-related protein RABA2a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04016 MAPK signaling pathway - plant 4
ath04070 Phosphatidylinositol signaling system 4
ath04075 Plant hormone signal transduction 4
ath04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath00541 Biosynthesis of various nucleotide sugars 2
ath01240 Biosynthesis of cofactors 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04075 Plant hormone signal transduction 2
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 3
osa04144 Endocytosis 2
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
bra00040 Pentose and glucuronate interconversions 2
bra00052 Galactose metabolism 2
bra00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr00020 Citrate cycle (TCA cycle) 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00430 Taurine and hypotaurine metabolism 6
tae00460 Cyanoamino acid metabolism 3
tae00480 Glutathione metabolism 3
tae00590 Arachidonic acid metabolism 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00940 Phenylpropanoid biosynthesis 2
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 3
cre00190 Oxidative phosphorylation 2
cre04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
sot04142 Lysosome 5
sot04145 Phagosome 5
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 6
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03015 mRNA surveillance pathway 4
nta04136 Autophagy - other 4
nta04382 Cornified envelope formation 4
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00190 Oxidative phosphorylation 3
nta04145 Phagosome 3
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823836 837490 100499980 4334619 4338288 100193335 100216670 103873290 103836445 100253476 18106002 25492545 11425116 123123750 123426386 123428721 107906582 106433281 106346261 5717499 8066597 110431783 102604566 102591603 102612243 102613896 100836616 100839494 107830561 107814193
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