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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101250919   mediator of RNA polymerase II transcription subunit 15a 
 sly-r.6   101250919   mediator of RNA polymerase II transcription subunit 15a 
 sot-r.1   102591617   uncharacterized LOC102591617 
 sot-r.1   102604452   mediator of RNA polymerase II transcription subunit 15a-like 
 nta-r.1   107776212   uncharacterized LOC107776212 
 nta-r.1   107776844   uncharacterized LOC107776844 
 ath-u.5   AT1G15790   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.5   102660079   mediator of RNA polymerase II transcription subunit 15a 
 bra-r.6   103872372   mediator of RNA polymerase II transcription subunit 15a 
 vvi-u.5   104877881   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.5   18096666   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.5   18096645   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.5   120580296   uncharacterized LOC120580296 
 mtr-u.5   11436839   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.5   11418696   mediator of RNA polymerase II transcription subunit 15a 
 ghi-r.1   107914148   mediator of RNA polymerase II transcription subunit 15a 
 ghi-r.1   107897283   mediator of RNA polymerase II transcription subunit 15a 
 bna-r.1   106346815   mediator of RNA polymerase II transcription subunit 15a-like 
 bna-r.1   106346813   uncharacterized LOC106346813 
 cit-r.1   102615750   mediator of RNA polymerase II transcription subunit 15a-like 
 cit-r.1   102617225   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.5   4346081   mediator of RNA polymerase II transcription subunit 15a 
 tae-r.2   123042798   mediator of RNA polymerase II transcription subunit 15a 
 tae-r.2   123055266   uncharacterized LOC123055266 
 tae-r.2   123191095   mediator of RNA polymerase II transcription subunit 15a 
 hvu-r.1   123428455   uncharacterized LOC123428455 
 hvu-r.1   123406175   mediator of RNA polymerase II transcription subunit 15a-like 
 hvu-r.1   123395234   uncharacterized LOC123395234 
 sbi-r.1   8054819   mediator of RNA polymerase II transcription subunit 15a 
 sbi-r.1   110436815   uncharacterized LOC110436815 

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Top 50 coexpressed genes to 101250919 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101250919 (sly-u.5 coexpression data)

CoexMap"101250919"


slyLOC101250919 | Entrez gene ID : 101250919      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa tae hvu sbi bdi zma cre
Paralog 2 2 2 1 1 1 1 2 3 2 2 2 1 3 3 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0031490 [list] [network] chromatin DNA binding  (39 genes)  IEA  
GO:0003713 [list] [network] transcription coactivator activity  (45 genes)  IEA  
Protein XP_010319382.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  extr 1  (predict for XP_010319382.2)
Subcellular
localization
TargetP
other 7  (predict for XP_010319382.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101250919
sly-r.6
for
101250919
sot-r.1
for
102591617
sot-r.1
for
102604452
nta-r.1
for
107776212
nta-r.1
for
107776844
ath-u.5
for
AT1G15790
gma-u.5
for
102660079
bra-r.6
for
103872372
vvi-u.5
for
104877881
ppo-u.5
for
18096666
ppo-u.5
for
18096645
mtr-u.5
for
120580296
mtr-u.5
for
11436839
mtr-u.5
for
11418696
ghi-r.1
for
107914148
ghi-r.1
for
107897283
bna-r.1
for
106346815
bna-r.1
for
106346813
cit-r.1
for
102615750
cit-r.1
for
102617225
osa-u.5
for
4346081
tae-r.2
for
123042798
tae-r.2
for
123055266
tae-r.2
for
123191095
hvu-r.1
for
123428455
hvu-r.1
for
123406175
hvu-r.1
for
123395234
sbi-r.1
for
8054819
sbi-r.1
for
110436815


Ortholog ID: 3275
Species sly sot sot nta nta ath gma bra vvi ppo ppo mtr mtr mtr ghi ghi bna bna cit cit osa tae tae tae hvu hvu hvu sbi sbi
Symbol LOC101250919 LOC102591617 LOC102604452 LOC107776212 LOC107776844 AT1G15790 LOC102660079 LOC103872372 LOC104877881 LOC18096666 LOC18096645 LOC120580296 LOC11436839 LOC11418696 LOC107914148 LOC107897283 LOC106346815 LOC106346813 LOC102615750 LOC102617225 LOC4346081 LOC123055266 LOC123191095 LOC123149933 LOC123428455 LOC123406175 LOC123395234 LOC8054819 LOC110436815
Function* mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC102591617 mediator of RNA polymerase II transcription subunit 15a-like uncharacterized LOC107776212 uncharacterized LOC107776844 mediator of RNA polymerase II transcription subunit 15a-like protein mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC120580296 mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a-like uncharacterized LOC106346813 mediator of RNA polymerase II transcription subunit 15a-like mediator of RNA polymerase II transcription subunit 15a mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC123055266 mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC123149933 uncharacterized LOC123428455 mediator of RNA polymerase II transcription subunit 15a-like uncharacterized LOC123395234 mediator of RNA polymerase II transcription subunit 15a uncharacterized LOC110436815
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00040 Pentose and glucuronate interconversions 2
vvi00053 Ascorbate and aldarate metabolism 2
vvi00561 Glycerolipid metabolism 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
cit03420 Nucleotide excision repair 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 3
hvu00280 Valine, leucine and isoleucine degradation 3
hvu00640 Propanoate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
sbi04144 Endocytosis 2
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101250919 102591617 102604452 107776212 107776844 838148 102660079 103872372 104877881 18096666 18096645 120580296 11436839 11418696 107914148 107897283 106346815 106346813 102615750 102617225 4346081 123055266 123191095 123149933 123428455 123406175 123395234 8054819 110436815
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