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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101251460   zinc finger protein SHOOT GRAVITROPISM 5 
 sly-r.6   101251460   zinc finger protein SHOOT GRAVITROPISM 5 
 sot-r.1   102587359   protein SHOOT GRAVITROPISM 5 
 nta-r.1   107826351   uncharacterized LOC107826351 
 ath-u.5   AT3G48550   SHOOT GRAVITROPISM-like protein 
 gma-u.5   100819947   zinc finger protein SHOOT GRAVITROPISM 5 
 bra-r.6   103874724   zinc finger protein SHOOT GRAVITROPISM 5 
 bra-r.6   103873132   zinc finger protein SHOOT GRAVITROPISM 5 
 vvi-u.5   100242196   uncharacterized LOC100242196 
 ppo-u.5   7454557   protein indeterminate-domain 14 
 ppo-u.5   7454719   zinc finger protein SHOOT GRAVITROPISM 5 
 mtr-u.5   11415627   zinc finger protein SHOOT GRAVITROPISM 5 
 ghi-r.1   107948615   zinc finger protein SHOOT GRAVITROPISM 5 
 ghi-r.1   121219318   zinc finger protein SHOOT GRAVITROPISM 5 
 ghi-r.1   107941970   zinc finger protein SHOOT GRAVITROPISM 5 
 cit-r.1   102613482   zinc finger protein SHOOT GRAVITROPISM 5 
 osa-u.5   4329440   protein indeterminate-domain 16 
 osa-u.5   4335653   uncharacterized LOC4335653 
 zma-u.5   111258512   uncharacterized LOC111258512 
 zma-u.5   103646579   protein indeterminate-domain 16 
 tae-r.2   123189046   protein indeterminate-domain 16 
 tae-r.2   123053137   protein indeterminate-domain 16 
 tae-r.2   123041333   protein indeterminate-domain 16 
 hvu-r.1   123430204   protein indeterminate-domain 16 
 sbi-r.1   8070957   MAP7 domain-containing protein 1 
 bdi-r.1   100824261   protein indeterminate-domain 16 

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Top 50 coexpressed genes to 101251460 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101251460 (sly-u.5 coexpression data)

CoexMap"101251460"


slyLOC101251460 | Entrez gene ID : 101251460      
Species sly sot nta ath gma bra vvi ppo mtr ghi cit osa zma tae hvu sbi bdi cre bna
Paralog 2 1 1 1 1 2 1 2 1 3 1 2 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009630 [list] [network] gravitropism  (14 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein XP_004236209.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_004236209.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_004236209.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101251460
sly-r.6
for
101251460
sot-r.1
for
102587359
nta-r.1
for
107826351
ath-u.5
for
AT3G48550
gma-u.5
for
100819947
bra-r.6
for
103874724
bra-r.6
for
103873132
vvi-u.5
for
100242196
ppo-u.5
for
7454557
ppo-u.5
for
7454719
mtr-u.5
for
11415627
ghi-r.1
for
107948615
ghi-r.1
for
121219318
ghi-r.1
for
107941970
cit-r.1
for
102613482
osa-u.5
for
4329440
osa-u.5
for
4335653
zma-u.5
for
111258512
zma-u.5
for
103646579
tae-r.2
for
123189046
tae-r.2
for
123053137
tae-r.2
for
123041333
hvu-r.1
for
123430204
sbi-r.1
for
8070957
bdi-r.1
for
100824261


Ortholog ID: 5772
Species sly sot nta ath gma bra bra vvi ppo ppo mtr ghi ghi cit osa osa zma zma tae tae tae hvu sbi bdi
Symbol LOC101251460 LOC102587359 LOC107826351 AT3G48550 LOC100819947 LOC103874724 LOC103873132 LOC100242196 LOC7454557 LOC7454719 LOC11415627 LOC107948615 LOC107903533 LOC102613482 LOC4329440 LOC4335653 LOC111258512 LOC103646579 LOC123189046 LOC123053137 LOC123041333 LOC123430204 LOC8070957 LOC100824261
Function* zinc finger protein SHOOT GRAVITROPISM 5 protein SHOOT GRAVITROPISM 5 uncharacterized LOC107826351 SHOOT GRAVITROPISM-like protein zinc finger protein SHOOT GRAVITROPISM 5 zinc finger protein SHOOT GRAVITROPISM 5 zinc finger protein SHOOT GRAVITROPISM 5 uncharacterized LOC100242196 protein indeterminate-domain 14 zinc finger protein SHOOT GRAVITROPISM 5 zinc finger protein SHOOT GRAVITROPISM 5 zinc finger protein SHOOT GRAVITROPISM 5 protein indeterminate-domain 14 zinc finger protein SHOOT GRAVITROPISM 5 protein indeterminate-domain 16 uncharacterized LOC4335653 uncharacterized LOC111258512 protein indeterminate-domain 16 protein indeterminate-domain 16 protein indeterminate-domain 16 protein indeterminate-domain 16 protein indeterminate-domain 16 MAP7 domain-containing protein 1 protein indeterminate-domain 16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01250 Biosynthesis of nucleotide sugars 4
gma00520 Amino sugar and nucleotide sugar metabolism 3
gma04145 Phagosome 2
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra01200 Carbon metabolism 2
bra04016 MAPK signaling pathway - plant 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101251460 102587359 107826351 824014 100819947 103874724 103873132 100242196 7454557 7454719 11415627 107948615 107903533 102613482 4329440 4335653 111258512 103646579 123189046 123053137 123041333 123430204 8070957 100824261
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