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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252496   tetrapyrrole-binding protein, chloroplastic 
 sly-r.6   101252496   tetrapyrrole-binding protein, chloroplastic 
 sly-m.5   101252496   tetrapyrrole-binding protein, chloroplastic 
 sot-r.1   102597536   tetrapyrrole-binding protein, chloroplastic 
 nta-r.1   107796760   tetrapyrrole-binding protein, chloroplastic-like 
 nta-r.1   107763426   tetrapyrrole-binding protein, chloroplastic-like 
 gma-u.5   100784051   tetrapyrrole-binding protein, chloroplastic 
 gma-u.5   100782053   tetrapyrrole-binding protein, chloroplastic 
 bra-r.6   103841784   tetrapyrrole-binding protein, chloroplastic 
 bra-r.6   103830212   tetrapyrrole-binding protein, chloroplastic 
 vvi-u.5   100259476   tetrapyrrole-binding protein, chloroplastic-like 
 ppo-u.5   18108770   tetrapyrrole-binding protein, chloroplastic 
 ppo-u.5   7469591   tetrapyrrole-binding protein, chloroplastic 
 mtr-u.5   25492658   tetrapyrrole-binding protein, chloroplastic 
 ghi-r.1   107957175   tetrapyrrole-binding protein, chloroplastic 
 ghi-r.1   107914666   tetrapyrrole-binding protein, chloroplastic 
 ghi-r.1   107896939   tetrapyrrole-binding protein, chloroplastic 
 bna-r.1   125591180   tetrapyrrole-binding protein, chloroplastic-like 
 bna-r.1   106368347   tetrapyrrole-binding protein, chloroplastic 
 bna-r.1   106359336   tetrapyrrole-binding protein, chloroplastic-like 
 cit-r.1   102617196   tetrapyrrole-binding protein, chloroplastic 
 osa-u.5   4350255   tetrapyrrole-binding protein, chloroplastic 
 tae-r.2   123096169   tetrapyrrole-binding protein, chloroplastic 
 hvu-r.1   123447804   tetrapyrrole-binding protein, chloroplastic 
 sbi-r.1   8074897   tetrapyrrole-binding protein, chloroplastic 
 bdi-r.1   100837008   tetrapyrrole-binding protein, chloroplastic 
 cre-r.1   CHLRE_05g246800v5   uncharacterized protein 

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Top 50 coexpressed genes to 101252496 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252496 (sly-u.5 coexpression data)

CoexMap"101252496"


slyLOC101252496 | Entrez gene ID : 101252496      
Species sly sot nta gma bra vvi ppo mtr ghi bna cit osa tae hvu sbi bdi cre zma ath
Paralog 3 1 2 2 2 1 2 1 3 3 1 1 1 1 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (5 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
GO:0046906 [list] [network] tetrapyrrole binding  (452 genes)  IEA  
Protein XP_004241410.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  pero 1,  cysk_nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_004241410.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_004241410.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252496
sly-r.6
for
101252496
sly-m.5
for
101252496
sot-r.1
for
102597536
nta-r.1
for
107796760
nta-r.1
for
107763426
gma-u.5
for
100784051
gma-u.5
for
100782053
bra-r.6
for
103841784
bra-r.6
for
103830212
vvi-u.5
for
100259476
ppo-u.5
for
18108770
ppo-u.5
for
7469591
mtr-u.5
for
25492658
ghi-r.1
for
107957175
ghi-r.1
for
107914666
ghi-r.1
for
107896939
bna-r.1
for
125591180
bna-r.1
for
106368347
bna-r.1
for
106359336
cit-r.1
for
102617196
osa-u.5
for
4350255
tae-r.2
for
123096169
hvu-r.1
for
123447804
sbi-r.1
for
8074897
bdi-r.1
for
100837008
cre-r.1
for
CHLRE_05g246800v5


Ortholog ID: 7260
Species sly sot nta nta gma gma bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna cit osa tae hvu sbi bdi cre
Symbol LOC101252496 LOC102597536 LOC107796760 LOC107763426 LOC100784051 LOC100782053 LOC103841784 LOC103830212 LOC100259476 LOC18108770 LOC7469591 LOC25492658 LOC107914666 LOC107896939 LOC107890537 LOC106368347 LOC106359336 LOC106353155 LOC102617196 LOC4350255 LOC123096169 LOC123447804 LOC8074897 LOC100837008 CHLRE_05g246800v5
Function* tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic-like tetrapyrrole-binding protein, chloroplastic-like tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic-like tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic-like tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic tetrapyrrole-binding protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 5
sly00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 9
sot00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 10
nta00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 10
nta00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 9
gma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 8
gma00195 Photosynthesis 4
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 6
ppo00195 Photosynthesis 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 11
ppo00860 Porphyrin metabolism 2
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 3
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 10
ghi00196 Photosynthesis - antenna proteins 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 6
ghi00195 Photosynthesis 4
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 8
tae00196 Photosynthesis - antenna proteins 6
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 4
hvu00860 Porphyrin metabolism 4
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 6
bdi00196 Photosynthesis - antenna proteins 5
bdi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 10
cre01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101252496 102597536 107796760 107763426 100784051 100782053 103841784 103830212 100259476 18108770 7469591 25492658 107914666 107896939 107890537 106368347 106359336 106353155 102617196 4350255 123096169 123447804 8074897 100837008 5726308
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