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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   Cyp-3   cysteine proteinase 3 
 sly-r.6   Cyp-3   cysteine proteinase 3 
 sly-u.5   101252200   cysteine proteinase 3-like 
 sot-r.1   102578939   cysteine proteinase 3 
 sot-r.1   102579266   cysteine proteinase 3-like 
 nta-r.1   107784768   cysteine proteinase 3 
 nta-r.1   107823208   cysteine proteinase 3-like 
 ath-u.5   AT3G45310   Cysteine proteinases superfamily protein 
 ath-u.5   ALP   aleurain-like protease 
 gma-u.5   100787165   pro-cathepsin H 
 bra-r.6   103851512   thiol protease aleurain 
 bra-r.6   103845456   thiol protease aleurain 
 vvi-u.5   100244107   thiol protease aleurain-like 
 ppo-u.5   18100334   thiol protease aleurain 
 mtr-u.5   25494167   pro-cathepsin H-like 
 mtr-u.5   120577892   pro-cathepsin H 
 ghi-r.1   107901061   thiol protease aleurain 
 ghi-r.1   121212573   thiol protease aleurain-like 
 ghi-r.1   107958837   thiol protease aleurain 
 bna-r.1   106431716   thiol protease aleurain-like 
 bna-r.1   106371600   thiol protease aleurain-like 
 bna-r.1   106401153   thiol protease aleurain 
 cit-r.1   102578016   cysteine protease Cp 
 osa-u.5   4347180   oryzain gamma chain-like 
 zma-u.5   542451   cysteine protease 2 
 tae-r.2   100037648   thiol protease aleurain 
 tae-r.2   123121517   thiol protease aleurain 
 tae-r.2   123111956   thiol protease aleurain 
 hvu-r.1   123396943   thiol protease aleurain 
 sbi-r.1   8062751   cysteine proteinase 2 
 bdi-r.1   100833741   thiol protease aleurain 

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Top 50 coexpressed genes to Cyp-3 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to Cyp-3 (sly-u.5 coexpression data)

CoexMap"101252505"


slyCyp-3 | Entrez gene ID : 101252505      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 2 2 1 2 1 1 2 3 3 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04142 [list] [network] Lysosome (84 genes)
GO BP
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (382 genes)  IEA  
GO CC
GO:0005764 [list] [network] lysosome  (47 genes)  IEA  
GO:0005615 [list] [network] extracellular space  (67 genes)  IEA  
GO MF
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (59 genes)  IEA  
Protein NP_001296313.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  extr 2,  E.R._vacu 2,  cyto 1,  golg 1  (predict for NP_001296313.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001296313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
Cyp-3
sly-r.6
for
Cyp-3
sly-u.5
for
101252200
sot-r.1
for
102578939
sot-r.1
for
102579266
nta-r.1
for
107784768
nta-r.1
for
107823208
ath-u.5
for
AT3G45310
ath-u.5
for
ALP
gma-u.5
for
100787165
bra-r.6
for
103851512
bra-r.6
for
103845456
vvi-u.5
for
100244107
ppo-u.5
for
18100334
mtr-u.5
for
25494167
mtr-u.5
for
120577892
ghi-r.1
for
107901061
ghi-r.1
for
121212573
ghi-r.1
for
107958837
bna-r.1
for
106431716
bna-r.1
for
106371600
bna-r.1
for
106401153
cit-r.1
for
102578016
osa-u.5
for
4347180
zma-u.5
for
542451
tae-r.2
for
100037648
tae-r.2
for
123121517
tae-r.2
for
123111956
hvu-r.1
for
123396943
sbi-r.1
for
8062751
bdi-r.1
for
100833741


Ortholog ID: 6281
Species sly sly sot sot nta nta ath ath gma bra bra vvi ppo mtr mtr ghi ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol Cyp-3 LOC101252200 LOC102578939 LOC102579266 LOC107784768 LOC107823208 AT3G45310 ALP LOC100787165 LOC103851512 LOC103845456 LOC100244107 LOC18100334 LOC25494167 LOC120577892 LOC107958837 LOC107907097 LOC107893361 LOC106371600 LOC106401153 LOC106385833 LOC102578016 LOC4347180 LOC542451 LOC100037648 LOC123121517 LOC123111956 LOC123396943 LOC8062751 LOC100833741
Function* cysteine proteinase 3 cysteine proteinase 3-like cysteine proteinase 3 cysteine proteinase 3-like cysteine proteinase 3 cysteine proteinase 3-like Cysteine proteinases superfamily protein aleurain-like protease pro-cathepsin H thiol protease aleurain thiol protease aleurain thiol protease aleurain-like thiol protease aleurain pro-cathepsin H-like pro-cathepsin H thiol protease aleurain thiol protease aleurain thiol protease aleurain thiol protease aleurain-like thiol protease aleurain thiol protease aleurain cysteine protease Cp oryzain gamma chain-like cysteine protease 2 thiol protease aleurain thiol protease aleurain thiol protease aleurain thiol protease aleurain cysteine proteinase 2 thiol protease aleurain
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 5
sot00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 3
nta04142 Lysosome 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 5
ath00240 Pyrimidine metabolism 2
ath00410 beta-Alanine metabolism 2
ath00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 8
ath00790 Folate biosynthesis 2
ath01240 Biosynthesis of cofactors 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 7
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo04142 Lysosome 2
ppo00053 Ascorbate and aldarate metabolism 2
ppo00480 Glutathione metabolism 2
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 7
ghi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 7
ghi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00380 Tryptophan metabolism 2
osa01200 Carbon metabolism 2
osa01240 Biosynthesis of cofactors 2
osa04142 Lysosome 2
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 9
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae00460 Cyanoamino acid metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00910 Nitrogen metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 4
sbi00561 Glycerolipid metabolism 2
sbi00460 Cyanoamino acid metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101252505 101252200 102578939 102579266 107784768 107823208 823669 836158 100787165 103851512 103845456 100244107 18100334 25494167 120577892 107958837 107907097 107893361 106371600 106401153 106385833 102578016 4347180 542451 100037648 123121517 123111956 123396943 8062751 100833741
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