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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252511   polyadenylate-binding protein-interacting protein 6 
 sly-r.6   101252511   polyadenylate-binding protein-interacting protein 6 
 sot-r.1   102581122   polyadenylate-binding protein-interacting protein 6 
 nta-r.1   107759782   polyadenylate-binding protein-interacting protein 6 
 nta-r.1   107825945   polyadenylate-binding protein-interacting protein 6-like 
 ath-u.5   CID6   CTC-interacting domain 6 
 gma-u.5   100527261   CUE domain-containing protein 
 gma-u.5   100781938   ubiquitin-associated (UBA) domain-like superfamily protein 
 bra-r.6   103874413   polyadenylate-binding protein-interacting protein 6 
 bra-r.6   103854744   polyadenylate-binding protein-interacting protein 6 
 vvi-u.5   100268154   polyadenylate-binding protein-interacting protein 5 
 ppo-u.5   7495740   polyadenylate-binding protein-interacting protein 5 
 mtr-u.5   11429627   polyadenylate-binding protein-interacting protein 6 
 ghi-r.1   107901381   polyadenylate-binding protein-interacting protein 5 
 bna-r.1   106366796   polyadenylate-binding protein-interacting protein 6-like 
 bna-r.1   106348539   polyadenylate-binding protein-interacting protein 6 
 cit-r.1   102628731   polyadenylate-binding protein-interacting protein 5 

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Top 50 coexpressed genes to 101252511 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252511 (sly-u.5 coexpression data)

CoexMap"101252511"


slyLOC101252511 | Entrez gene ID : 101252511      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit sbi cre tae zma osa bdi hvu
Paralog 2 1 2 1 2 2 1 1 1 1 2 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0043130 [list] [network] ubiquitin binding  (53 genes)  IEA  
Protein XP_004245241.1 [sequence] [blastp]
XP_010325150.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  plas 1,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for XP_004245241.1)
nucl 6,  nucl_plas 4,  plas 1,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for XP_010325150.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_004245241.1)
other 7,  chlo 3  (predict for XP_010325150.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252511
sly-r.6
for
101252511
sot-r.1
for
102581122
nta-r.1
for
107759782
nta-r.1
for
107825945
ath-u.5
for
CID6
gma-u.5
for
100527261
gma-u.5
for
100781938
bra-r.6
for
103874413
bra-r.6
for
103854744
vvi-u.5
for
100268154
ppo-u.5
for
7495740
mtr-u.5
for
11429627
ghi-r.1
for
107901381
bna-r.1
for
106366796
bna-r.1
for
106348539
cit-r.1
for
102628731


Ortholog ID: 3618
Species sly sot nta nta ath gma gma vvi ppo mtr ghi ghi bna cit
Symbol LOC101252511 LOC102581122 LOC107759782 LOC107825945 CID6 LOC100527261 LOC100781938 LOC100268154 LOC7495740 LOC11429627 LOC107893026 LOC121230394 LOC106391063 LOC102628731
Function* polyadenylate-binding protein-interacting protein 6 polyadenylate-binding protein-interacting protein 6 polyadenylate-binding protein-interacting protein 6 polyadenylate-binding protein-interacting protein 6-like CTC-interacting domain 6 CUE domain-containing protein ubiquitin-associated (UBA) domain-like superfamily protein polyadenylate-binding protein-interacting protein 5 polyadenylate-binding protein-interacting protein 5 polyadenylate-binding protein-interacting protein 6 polyadenylate-binding protein-interacting protein 5 polyadenylate-binding protein-interacting protein 5 polyadenylate-binding protein-interacting protein 6-like polyadenylate-binding protein-interacting protein 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04130 SNARE interactions in vesicular transport 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 3
vvi03272 Virion - Hepatitis viruses 3
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00190 Oxidative phosphorylation 2
ppo04142 Lysosome 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 3
ghi00410 beta-Alanine metabolism 3
ghi00770 Pantothenate and CoA biosynthesis 3
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 9
bna03015 mRNA surveillance pathway 4
bna04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101252511 102581122 107759782 107825945 832629 100527261 100781938 100268154 7495740 11429627 107893026 121230394 106391063 102628731
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