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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252547   biotin--protein ligase 2-like 
 sly-r.6   101252547   biotin--protein ligase 2-like 
 ath-u.5   HCS1   holocarboxylase synthase 1 
 gma-u.5   100818402   biotin--protein ligase 2 
 gma-u.5   100813650   biotin--protein ligase 2 
 vvi-u.5   100248922   biotin--protein ligase 1, chloroplastic 
 ppo-u.5   7495112   biotin--protein ligase 2 
 ppo-u.5   7460934   biotin--protein ligase 1, chloroplastic 
 mtr-u.5   11411288   biotin--protein ligase 2 
 osa-u.5   4328417   biotin--protein ligase 2 
 zma-u.5   103626660   biotin--protein ligase 2 

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Top 50 coexpressed genes to 101252547 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252547 (sly-u.5 coexpression data)

CoexMap"101252547"


slyLOC101252547 | Entrez gene ID : 101252547      
Species sly ath gma vvi ppo mtr osa zma tae bra bdi sbi nta cit cre hvu sot bna ghi
Paralog 2 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00780 [list] [network] Biotin metabolism (19 genes)
GO BP
GO:0036211 [list] [network] protein modification process  (1794 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0004077 [list] [network] biotin--[biotin carboxyl-carrier protein] ligase activity  (1 genes)  IEA  
Protein XP_004250339.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  nucl 3,  cyto_mito 2,  nucl_plas 2,  chlo 1,  plas 1,  cyto_nucl 1  (predict for XP_004250339.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_004250339.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252547

.
sly-r.6
for
101252547

.
ath-u.5
for
HCS1

.
gma-u.5
for
100818402

.
gma-u.5
for
100813650

.
vvi-u.5
for
100248922

.
ppo-u.5
for
7495112

.
ppo-u.5
for
7460934

.
mtr-u.5
for
11411288

.
osa-u.5
for
4328417

.
zma-u.5
for
103626660

.


Ortholog ID: 7163
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol HCS1 LOC100813650 LOC100818402 LOC101252547 LOC4328417 LOC103626660 LOC103852453 LOC100248922 LOC7460934 LOC7495112 LOC11411288 LOC123143975 LOC123402181 LOC107922700 LOC107942037 LOC125585745 LOC106392404 CHLRE_09g406000v5 LOC8074691 LOC102584525 LOC102613353 LOC100844888 LOC100835520 LOC107787843 LOC107819232
Function* holocarboxylase synthase 1 biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2-like biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 1, chloroplastic biotin--protein ligase 1, chloroplastic biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2-like biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2-like biotin--protein ligase 2 uncharacterized protein biotin--protein ligase 2 biotin--protein ligase 2-like biotin--protein ligase 2-like biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2 biotin--protein ligase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00670 One carbon pool by folate 3
gma01200 Carbon metabolism 3
gma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly01240 Biosynthesis of cofactors 3
sly01200 Carbon metabolism 3
sly00780 Biotin metabolism 2
sly00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 10
bra01200 Carbon metabolism 10
bra00010 Glycolysis / Gluconeogenesis 8
bra00020 Citrate cycle (TCA cycle) 4
bra00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae00780 Biotin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 4
ghi00780 Biotin metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 4
ghi00780 Biotin metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 8
bna01200 Carbon metabolism 8
bna00010 Glycolysis / Gluconeogenesis 6
bna00780 Biotin metabolism 4
bna00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 8
bna01200 Carbon metabolism 8
bna00010 Glycolysis / Gluconeogenesis 6
bna01230 Biosynthesis of amino acids 4
bna00780 Biotin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00780 Biotin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817112 100813650 100818402 101252547 4328417 103626660 103852453 100248922 7460934 7495112 11411288 123143975 123402181 107922700 107942037 125585745 106392404 5723136 8074691 102584525 102613353 100844888 100835520 107787843 107819232
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