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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252646   uncharacterized LOC101252646 
 sly-r.6   101252646   uncharacterized LOC101252646 
 sly-u.5   101247004   uncharacterized LOC101247004 
 ath-u.5   LETM1   LETM1-like protein 
 ath-u.5   LETM2   LETM1-like protein 
 gma-u.5   100818667   mitochondrial proton/calcium exchanger protein 
 gma-u.5   100809877   mitochondrial proton/calcium exchanger protein 
 gma-u.5   100809432   LETM1 domain-containing protein LETM2, mitochondrial 
 vvi-u.5   100853162   uncharacterized LOC100853162 
 vvi-u.5   100257815   uncharacterized LOC100257815 
 ppo-u.5   7464593   uncharacterized LOC7464593 
 ppo-u.5   7459936   uncharacterized LOC7459936 
 ppo-u.5   7462121   uncharacterized LOC7462121 
 mtr-u.5   11438379   mitochondrial proton/calcium exchanger protein 
 mtr-u.5   11426591   mitochondrial proton/calcium exchanger protein 
 osa-u.5   4336282   uncharacterized LOC4336282 
 osa-u.5   4329936   uncharacterized LOC4329936 
 zma-u.5   103646271   mitochondrial proton/calcium exchanger protein 
 zma-u.5   103627398   mitochondrial proton/calcium exchanger protein 
 zma-u.5   100501079   LETM1-like protein 

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Top 50 coexpressed genes to 101252646 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252646 (sly-u.5 coexpression data)

CoexMap"101252646"


slyLOC101252646 | Entrez gene ID : 101252646      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 3 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030003 [list] [network] intracellular monoatomic cation homeostasis  (90 genes)  IEA  
GO CC
GO:0005743 [list] [network] mitochondrial inner membrane  (97 genes)  IEA  
GO MF
GO:0043022 [list] [network] ribosome binding  (51 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (241 genes)  IEA  
Protein XP_004250084.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 2  (predict for XP_004250084.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_004250084.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252646
sly-r.6
for
101252646
sly-u.5
for
101247004
ath-u.5
for
LETM1
ath-u.5
for
LETM2
gma-u.5
for
100818667
gma-u.5
for
100809877
gma-u.5
for
100809432
vvi-u.5
for
100853162
vvi-u.5
for
100257815
ppo-u.5
for
7464593
ppo-u.5
for
7459936
ppo-u.5
for
7462121
mtr-u.5
for
11438379
mtr-u.5
for
11426591
osa-u.5
for
4336282
osa-u.5
for
4329936
zma-u.5
for
103646271
zma-u.5
for
103627398
zma-u.5
for
100501079


Ortholog ID: 2349
Species sly sly sot sot nta nta ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa osa zma zma tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101247004 LOC101252646 LOC102594836 LOC102600829 LOC107775562 LOC107823016 LETM1 LETM2 LOC100803949 LOC100809877 LOC103831058 LOC103841828 LOC100257815 LOC100853162 LOC7459936 LOC7464593 LOC11426591 LOC11438379 LOC107896891 LOC107921216 LOC111199282 LOC106445122 LOC102618806 LOC102623210 LOC4336282 LOC4329936 LOC103646271 LOC100501079 LOC100037641 LOC123402008 LOC123427122 LOC8060201 LOC8072520 LOC100844098 LOC100845958 CHLRE_15g639150v5
Function* uncharacterized LOC101247004 uncharacterized LOC101252646 LETM1 and EF-hand domain-containing protein 1, mitochondrial-like LETM1 and EF-hand domain-containing protein 1, mitochondrial uncharacterized LOC107775562 uncharacterized LOC107823016 LETM1-like protein LETM1-like protein mitochondrial proton/calcium exchanger protein mitochondrial proton/calcium exchanger protein mitochondrial proton/calcium exchanger protein mitochondrial proton/calcium exchanger protein uncharacterized LOC100257815 uncharacterized LOC100853162 uncharacterized LOC7459936 uncharacterized LOC7464593 mitochondrial proton/calcium exchanger protein mitochondrial proton/calcium exchanger protein mitochondrial proton/calcium exchanger protein uncharacterized LOC107921216 mitochondrial proton/calcium exchanger protein-like mitochondrial proton/calcium exchanger protein uncharacterized LOC102618806 uncharacterized LOC102623210 uncharacterized LOC4336282 uncharacterized LOC4329936 mitochondrial proton/calcium exchanger protein LETM1-like protein mitochondrial proton/calcium exchanger protein mitochondrial proton/calcium exchanger protein-like mitochondrial proton/calcium exchanger protein-like LETM1 domain-containing protein mdm28, mitochondrial LETM1 and EF-hand domain-containing protein 1, mitochondrial mitochondrial proton/calcium exchanger protein LETM1 domain-containing protein LETM2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04120 Ubiquitin mediated proteolysis 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna03083 Polycomb repressive complex 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 5
osa00565 Ether lipid metabolism 3
osa00440 Phosphonate and phosphinate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 10
zma00020 Citrate cycle (TCA cycle) 9
zma00190 Oxidative phosphorylation 4
zma00640 Propanoate metabolism 4
zma00511 Other glycan degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03250 Viral life cycle - HIV-1 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 5
cre04144 Endocytosis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247004 101252646 102594836 102600829 107775562 107823016 825151 842865 100803949 100809877 103831058 103841828 100257815 100853162 7459936 7464593 11426591 11438379 107896891 107921216 111199282 106445122 102618806 102623210 4336282 4329936 103646271 100501079 100037641 123402008 123427122 8060201 8072520 100844098 100845958 5726710
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