ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101252727	peptide methionine sulfoxide reductase B5
sly-r.6	101252727	peptide methionine sulfoxide reductase B5
sly-u.5	101265376	peptide methionine sulfoxide reductase B5
sly-u.5	101266452	peptide methionine sulfoxide reductase B5
ath-u.5	MSRB3	methionine sulfoxide reductase B3
ath-u.5	MSRB2	methionine sulfoxide reductase B 2
ath-u.5	MSRB9	methionine sulfoxide reductase B9
gma-u.5	100499893	uncharacterized LOC100499893
gma-u.5	100305558	uncharacterized LOC100305558
gma-u.5	100799071	peptide methionine sulfoxide reductase B2, chloroplastic-like
vvi-u.5	100242556	peptide methionine sulfoxide reductase B5
vvi-u.5	100264443	peptide methionine sulfoxide reductase B5
ppo-u.5	7454233	peptide methionine sulfoxide reductase B5
ppo-u.5	7469676	peptide methionine sulfoxide reductase B5
ppo-u.5	7470782	peptide methionine sulfoxide reductase B5
mtr-u.5	11439809	peptide methionine sulfoxide reductase B5
mtr-u.5	11442955	peptide methionine sulfoxide reductase B5
mtr-u.5	11439810	peptide methionine sulfoxide reductase B5
osa-u.5	4332888	peptide methionine sulfoxide reductase B5-like
zma-u.5	100273309	uncharacterized LOC100273309
zma-u.5	100281999	uncharacterized LOC100281999

Top 50 coexpressed genes to 101252727 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101252727 (sly-u.5 coexpression data)

CoexMap"101252727"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0030091 [list] [network] protein repair	(8 genes)	IEA
GO:0006979 [list] [network] response to oxidative stress	(193 genes)	IEA

GO CC

GO MF

GO:0033743 [list] [network] peptide-methionine (R)-S-oxide reductase activity

(4 genes)

IEA

Protein

XP_004230652.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, cyto 1, vacu 1, cyto_nucl 1

(predict for XP_004230652.1)

Subcellular
localization
TargetP

chlo 5, other 3

(predict for XP_004230652.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101252727	sly-r.6 for 101252727	sly-u.5 for 101265376	sly-u.5 for 101266452	ath-u.5 for MSRB3	ath-u.5 for MSRB2	ath-u.5 for MSRB9	gma-u.5 for 100499893	gma-u.5 for 100305558	gma-u.5 for 100799071	vvi-u.5 for 100242556	vvi-u.5 for 100264443	ppo-u.5 for 7454233	ppo-u.5 for 7469676	ppo-u.5 for 7470782	mtr-u.5 for 11439809	mtr-u.5 for 11442955	mtr-u.5 for 11439810	osa-u.5 for 4332888	zma-u.5 for 100273309	zma-u.5 for 100281999

Ortholog

Ortholog ID: 1667

Species

sly

sot

nta

ath

gma

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

MSRB7

MSRB8

Function^*

peptide methionine sulfoxide reductase B5

peptide methionine sulfoxide reductase B5-like

methionine sulfoxide reductase B7

methionine sulfoxide reductase B8

peptide methionine sulfoxide reductase B2, chloroplastic-like

uncharacterized LOC100305558

peptide methionine sulfoxide reductase B5

peptide methionine sulfoxide reductase B5-like

uncharacterized LOC100281999

uncharacterized LOC100273309

peptide methionine sulfoxide reductase B5

peptide methionine sulfoxide reductase B5-like

peptide methionine sulfoxide reductase B5

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	4
sly01320	Sulfur cycle	3
sly04016	MAPK signaling pathway - plant	3
sly04075	Plant hormone signal transduction	3
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	10
sot00710	Carbon fixation by Calvin cycle	8
sot00630	Glyoxylate and dicarboxylate metabolism	6
sot00940	Phenylpropanoid biosynthesis	2
sot00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00920	Sulfur metabolism	6
nta01320	Sulfur cycle	6
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2
gma00620	Pyruvate metabolism	2
gma00450	Selenocompound metabolism	2
gma00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00920	Sulfur metabolism	2
vvi01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00920	Sulfur metabolism	5
ppo01320	Sulfur cycle	4
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2
ghi00195	Photosynthesis	2
ghi00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00920	Sulfur metabolism	2
ghi00260	Glycine, serine and threonine metabolism	2
ghi00460	Cyanoamino acid metabolism	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	6
bna01320	Sulfur cycle	6
bna00910	Nitrogen metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00480	Glutathione metabolism	2
cit00270	Cysteine and methionine metabolism	2
cit00670	One carbon pool by folate	2
cit04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	12
zma04145	Phagosome	7
zma04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	4
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04145	Phagosome	2
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00195	Photosynthesis	4
sbi00190	Oxidative phosphorylation	3
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3

Expression

Expression pattern

Entrez Gene ID^*

101266452

101252727

102588208

102601102

107764249

107764271

828271

828272

100799071

100305558

100242556

100264443

7454233

7469676

11442955

107938855

107926360

106420997

125594134

102619922

102628950

4332888

100281999

100273309

123128577

123132440

123402682

123441634

8076880

8080799

100822538

100831982

5724554

5724555

The preparation time of this page was 0.1 [sec].


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	4	3	3	2	3	3	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101252727 (sly-u.5 coexpression data)

Top 50 enrichment test to 101252727 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**