ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101253615	uncharacterized LOC101253615
sly-r.6	101253615	uncharacterized LOC101253615
sly-u.5	101248439	uncharacterized LOC101248439
ath-u.5	AT3G09050	8-amino-7-oxononanoate synthase
gma-u.5	100805929	uncharacterized LOC100805929
vvi-u.5	100242508	uncharacterized LOC100242508
ppo-u.5	7468042	uncharacterized LOC7468042
mtr-u.5	11412574	uncharacterized LOC11412574
osa-u.5	4324817	uncharacterized LOC4324817
zma-u.5	100501085	uncharacterized LOC100501085

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(632 genes)

IEA

GO MF

Protein

XP_004246340.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 2, plas 1, cyto_plas 1, E.R. 1, pero 1, golg 1

(predict for XP_004246340.1)

Subcellular
localization
TargetP

chlo 4, other 3

(predict for XP_004246340.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101253615	sly-r.6 for 101253615	sly-u.5 for 101248439	ath-u.5 for AT3G09050	gma-u.5 for 100805929	vvi-u.5 for 100242508	ppo-u.5 for 7468042	mtr-u.5 for 11412574	osa-u.5 for 4324817	zma-u.5 for 100501085

Ortholog ID: 6863

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC101248439

uncharacterized LOC101253615

uncharacterized LOC102579061

uncharacterized LOC102583453

uncharacterized LOC107811426

8-amino-7-oxononanoate synthase

uncharacterized LOC100805929

uncharacterized LOC103870562

uncharacterized LOC103848320

uncharacterized LOC100242508

uncharacterized LOC7468042

uncharacterized LOC11412574

uncharacterized LOC107958039

uncharacterized LOC106427906

uncharacterized LOC125609108

uncharacterized LOC4324817

uncharacterized LOC100501085

uncharacterized LOC123062626

uncharacterized LOC123444870

uncharacterized LOC8060108

uncharacterized LOC100831719

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	6
sot00710	Carbon fixation by Calvin cycle	5
sot00630	Glyoxylate and dicarboxylate metabolism	3
sot00030	Pentose phosphate pathway	3
sot00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00195	Photosynthesis	2
bra00790	Folate biosynthesis	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	2
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00670	One carbon pool by folate	2
bna04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00670	One carbon pool by folate	2
bna04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00620	Pyruvate metabolism	2
bdi00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

101248439

101253615

102579061

102583453

107811426

820058

100805929

103870562

103848320

100242508

7468042

11412574

107958039

106427906

125609108

4324817

100501085

123062626

123444870

8060108

100831719

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101253615 (sly-u.5 coexpression data)

Top 50 enrichment test to 101253615 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	3	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101253615 (sly-u.5 coexpression data)

Top 50 enrichment test to 101253615 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**