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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101253831   E3 ubiquitin ligase SINA2 
 sly-r.6   101253831   E3 ubiquitin ligase SINA2 
 sly-m.5   101253831   E3 ubiquitin ligase SINA2 
 sly-u.5   101264159   E3 ubiquitin ligase SINA6 
 sly-u.5   SlSINA1   E3 ubiquitin ligase SINA1 
 sly-u.5   SINA4   E3 ubiquitin ligase SINA4 
 sot-r.1   102599941   E3 ubiquitin-protein ligase SINAT5-like 
 sot-r.1   102584453   E3 ubiquitin-protein ligase SINAT5-like 
 sot-r.1   102584192   E3 ubiquitin-protein ligase SINAT2-like 
 nta-r.1   107763129   E3 ubiquitin-protein ligase SINAT3 
 nta-r.1   107761452   E3 ubiquitin-protein ligase SINAT5 
 nta-r.1   107773987   E3 ubiquitin-protein ligase SINAT2 
 ath-u.5   AT2G41980   Protein with RING/U-box and TRAF-like domain 
 ath-u.5   SINAT2   uncharacterized protein 
 ath-u.5   AT3G61790   Protein with RING/U-box and TRAF-like domain 
 gma-u.5   100781022   E3 ubiquitin-protein ligase DIS1 
 gma-u.5   100782764   E3 ubiquitin-protein ligase SINAT3 
 gma-u.5   100792687   E3 ubiquitin-protein ligase SINAT3 
 bra-r.6   103834788   E3 ubiquitin-protein ligase SINAT4 
 bra-r.6   103867677   E3 ubiquitin-protein ligase SINAT4 
 bra-r.6   103865920   putative E3 ubiquitin-protein ligase SINAT1 
 vvi-u.5   100244678   E3 ubiquitin-protein ligase DIS1 
 vvi-u.5   100267231   E3 ubiquitin-protein ligase SINAT2 
 vvi-u.5   100252009   E3 ubiquitin-protein ligase SINAT5 
 ppo-u.5   7462783   E3 ubiquitin-protein ligase DIS1 
 ppo-u.5   7455750   E3 ubiquitin-protein ligase SINAT2 
 ppo-u.5   7463600   E3 ubiquitin-protein ligase SINAT2 
 mtr-u.5   11418493   E3 ubiquitin-protein ligase SINAT2 
 mtr-u.5   11418807   E3 ubiquitin-protein ligase DIS1 
 mtr-u.5   25483549   E3 ubiquitin-protein ligase SINAT2 
 ghi-r.1   107930222   E3 ubiquitin-protein ligase SINAT5 
 ghi-r.1   107923926   E3 ubiquitin-protein ligase SINAT5-like 
 ghi-r.1   107923566   E3 ubiquitin-protein ligase SINAT5 
 bna-r.1   111215125   putative E3 ubiquitin-protein ligase SINAT1 
 bna-r.1   125585149   E3 ubiquitin-protein ligase SINAT2-like 
 bna-r.1   125575231   E3 ubiquitin-protein ligase SINAT3 
 cit-r.1   127898595   E3 ubiquitin-protein ligase SINAT3 
 cit-r.1   102616953   E3 ubiquitin-protein ligase SINAT2 
 cit-r.1   102619672   E3 ubiquitin-protein ligase SINAT2 
 osa-u.5   9266295   E3 ubiquitin-protein ligase DIS1-like 
 osa-u.5   4338181   E3 ubiquitin-protein ligase SINAT3 
 osa-u.5   4327774   E3 ubiquitin-protein ligase SINAT5 
 zma-u.5   100192741   putative seven in absentia domain family protein 
 zma-u.5   100279741   uncharacterized LOC100279741 
 zma-u.5   100170242   uncharacterized LOC100170242 
 tae-r.2   123060825   E3 ubiquitin-protein ligase SINAT5 
 tae-r.2   123051734   E3 ubiquitin-protein ligase DIS1 
 tae-r.2   123043860   E3 ubiquitin-protein ligase DIS1 
 hvu-r.1   123443282   E3 ubiquitin-protein ligase SINAT5-like 
 hvu-r.1   123428647   E3 ubiquitin-protein ligase SINAT5-like 
 hvu-r.1   123424892   E3 ubiquitin-protein ligase DIS1 
 sbi-r.1   8077555   E3 ubiquitin-protein ligase SINAT3 
 sbi-r.1   8058290   E3 ubiquitin-protein ligase SINAT5 
 sbi-r.1   8080816   E3 ubiquitin-protein ligase SINAT3 
 bdi-r.1   100826252   E3 ubiquitin-protein ligase SINAT5 
 bdi-r.1   100827553   E3 ubiquitin-protein ligase DIS1 
 bdi-r.1   100832893   E3 ubiquitin-protein ligase DIS1 

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Top 50 coexpressed genes to 101253831 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101253831 (sly-u.5 coexpression data)

CoexMap"101253831"


slyLOC101253831 | Entrez gene ID : 101253831      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 6 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04120 [list] [network] Ubiquitin mediated proteolysis (151 genes)
GO BP
GO:0007275 [list] [network] multicellular organism development  (199 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (283 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004229988.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 3,  nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_004229988.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004229988.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101253831
sly-r.6
for
101253831
sly-m.5
for
101253831
sly-u.5
for
101264159
sly-u.5
for
SlSINA1
sly-u.5
for
SINA4
sot-r.1
for
102599941
sot-r.1
for
102584453
sot-r.1
for
102584192
nta-r.1
for
107763129
nta-r.1
for
107761452
nta-r.1
for
107773987
ath-u.5
for
AT2G41980
ath-u.5
for
SINAT2
ath-u.5
for
AT3G61790
gma-u.5
for
100781022
gma-u.5
for
100782764
gma-u.5
for
100792687
bra-r.6
for
103834788
bra-r.6
for
103867677
bra-r.6
for
103865920
vvi-u.5
for
100244678
vvi-u.5
for
100267231
vvi-u.5
for
100252009
ppo-u.5
for
7462783
ppo-u.5
for
7455750
ppo-u.5
for
7463600
mtr-u.5
for
11418493
mtr-u.5
for
11418807
mtr-u.5
for
25483549
ghi-r.1
for
107930222
ghi-r.1
for
107923926
ghi-r.1
for
107923566
bna-r.1
for
111215125
bna-r.1
for
125585149
bna-r.1
for
125575231
cit-r.1
for
127898595
cit-r.1
for
102616953
cit-r.1
for
102619672
osa-u.5
for
9266295
osa-u.5
for
4338181
osa-u.5
for
4327774
zma-u.5
for
100192741
zma-u.5
for
100279741
zma-u.5
for
100170242
tae-r.2
for
123060825
tae-r.2
for
123051734
tae-r.2
for
123043860
hvu-r.1
for
123443282
hvu-r.1
for
123428647
hvu-r.1
for
123424892
sbi-r.1
for
8077555
sbi-r.1
for
8058290
sbi-r.1
for
8080816
bdi-r.1
for
100826252
bdi-r.1
for
100827553
bdi-r.1
for
100832893


Ortholog ID: 342
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC101264159 SlSINA1 LOC101246723 LOC102599941 LOC102602007 LOC102602506 LOC107773987 LOC107784733 LOC107794971 AT2G41980 AT3G61790 AT5G53360 LOC100792687 LOC100810573 LOC100500061 LOC103867677 LOC103862812 LOC103830327 LOC100252009 LOC100233085 LOC100233084 LOC7455750 LOC7486772 LOC25483549 LOC25500674 LOC25499735 LOC107916315 LOC107916308 LOC107940377 LOC111215125 LOC106428173 LOC106388271 LOC102619672 LOC102623798 LOC102624862 LOC4338181 LOC4327774 LOC4329066 LOC100170242 LOC100170241 LOC100170243 LOC123043860 LOC123077898 LOC123165457 LOC123443282 LOC123428647 LOC123424892 LOC8058290 LOC8080816 LOC8073139 LOC100826252 LOC100832893 LOC100833057
Function* E3 ubiquitin ligase SINA6 E3 ubiquitin ligase SINA1 E3 ubiquitin ligase SINA3 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT3-like E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT3 Protein with RING/U-box and TRAF-like domain Protein with RING/U-box and TRAF-like domain TRAF-like superfamily protein E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT3-like E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT4 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 SINA2p SINA1p E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase DIS1 putative E3 ubiquitin-protein ligase SINAT1 putative E3 ubiquitin-protein ligase SINAT1 putative E3 ubiquitin-protein ligase SINAT1 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase DIS1-like E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 uncharacterized LOC100170242 uncharacterized LOC100170241 uncharacterized LOC100170243 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 2
sly04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly04016 MAPK signaling pathway - plant 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 4
sot01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
nta00310 Lysine degradation 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00280 Valine, leucine and isoleucine degradation 2
bna00640 Propanoate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00220 Arginine biosynthesis 2
bna00230 Purine metabolism 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00220 Arginine biosynthesis 2
bna00230 Purine metabolism 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma04712 Circadian rhythm - plant 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 8
tae03083 Polycomb repressive complex 5
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04814 Motor proteins 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101264159 101263446 101246723 102599941 102602007 102602506 107773987 107784733 107794971 818798 825352 835417 100792687 100810573 100500061 103867677 103862812 103830327 100252009 100233085 100233084 7455750 7486772 25483549 25500674 25499735 107916315 107916308 107940377 111215125 106428173 106388271 102619672 102623798 102624862 4338181 4327774 4329066 100170242 100170241 100170243 123043860 123077898 123165457 123443282 123428647 123424892 8058290 8080816 8073139 100826252 100832893 100833057
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