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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254454   ferredoxin C 1, chloroplastic 
 sly-r.6   101254454   ferredoxin C 1, chloroplastic 
 sly-m.5   101254454   ferredoxin C 1, chloroplastic 
 sot-r.1   102590683   ferredoxin-1 
 nta-r.1   107813963   ferredoxin C 1, chloroplastic-like 
 nta-r.1   107803171   ferredoxin C 1, chloroplastic-like 
 gma-u.5   100794941   ferredoxin C 1, chloroplastic 
 gma-u.5   100500300   2Fe-2S ferredoxin-like superfamily protein 
 bra-r.6   103871530   ferredoxin C 1, chloroplastic 
 ppo-u.5   7474207   ferredoxin C 1, chloroplastic 
 ppo-u.5   7467494   ferredoxin C 1, chloroplastic 
 mtr-u.5   11441450   ferredoxin C 1, chloroplastic 
 ghi-r.1   107928441   ferredoxin C 1, chloroplastic 
 ghi-r.1   121221028   ferredoxin C 1, chloroplastic 
 bna-r.1   111213644   ferredoxin C 1, chloroplastic 
 bna-r.1   106369209   ferredoxin C 1, chloroplastic-like 
 cit-r.1   102630095   ferredoxin C 1, chloroplastic 
 osa-u.5   4333624   ferredoxin C 1, chloroplastic 
 zma-u.5   100284745   ferredoxin 
 tae-r.2   123090583   ferredoxin C 1, chloroplastic-like 
 tae-r.2   123095623   ferredoxin C 1, chloroplastic 
 tae-r.2   123087348   ferredoxin C 1, chloroplastic 
 hvu-r.1   123446939   ferredoxin C 1, chloroplastic 
 sbi-r.1   8056764   ferredoxin 
 bdi-r.1   100842491   ferredoxin 
 cre-r.1   CHLRE_07g334800v5   uncharacterized protein 

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Top 50 coexpressed genes to 101254454 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254454 (sly-u.5 coexpression data)

CoexMap"101254454"


slyLOC101254454 | Entrez gene ID : 101254454    
Species sly sot nta gma bra ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre vvi ath
Paralog 3 1 2 2 1 2 1 2 2 1 1 1 3 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00195 [list] [network] Photosynthesis (83 genes)
GO BP
GO:0022900 [list] [network] electron transport chain  (73 genes)  IEA  
GO CC
GO MF
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (41 genes)  IEA  
GO:0009055 [list] [network] electron transfer activity  (77 genes)  IEA  
Protein XP_004234013.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_004234013.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004234013.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254454
sly-r.6
for
101254454
sly-m.5
for
101254454
sot-r.1
for
102590683
nta-r.1
for
107813963
nta-r.1
for
107803171
gma-u.5
for
100794941
gma-u.5
for
100500300
bra-r.6
for
103871530
ppo-u.5
for
7474207
ppo-u.5
for
7467494
mtr-u.5
for
11441450
ghi-r.1
for
107928441
ghi-r.1
for
121221028
bna-r.1
for
111213644
bna-r.1
for
106369209
cit-r.1
for
102630095
osa-u.5
for
4333624
zma-u.5
for
100284745
tae-r.2
for
123090583
tae-r.2
for
123095623
tae-r.2
for
123087348
hvu-r.1
for
123446939
sbi-r.1
for
8056764
bdi-r.1
for
100842491
cre-r.1
for
CHLRE_07g334800v5


Ortholog ID: 9574
Species sly sot nta nta gma gma bra ppo ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101254454 LOC102590683 LOC107813963 LOC107803171 LOC100794941 LOC100500300 LOC103871530 LOC7474207 LOC7467494 LOC11441450 LOC107928441 LOC121221028 LOC111213644 LOC106369209 LOC102630095 LOC4333624 LOC100284745 LOC123090583 LOC123095623 LOC123087348 LOC123446939 LOC8056764 LOC100842491 CHLRE_07g334800v5
Function* ferredoxin C 1, chloroplastic ferredoxin-1 ferredoxin C 1, chloroplastic-like ferredoxin C 1, chloroplastic-like ferredoxin C 1, chloroplastic 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic-like ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin ferredoxin C 1, chloroplastic-like ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin C 1, chloroplastic ferredoxin ferredoxin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot00195 Photosynthesis 4
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00710 Carbon fixation by Calvin cycle 4
bra00195 Photosynthesis 3
bra03010 Ribosome 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 3
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00195 Photosynthesis 3
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00195 Photosynthesis 3
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00195 Photosynthesis 3
tae00030 Pentose phosphate pathway 2
tae00230 Purine metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 5
cre03060 Protein export 3
cre01240 Biosynthesis of cofactors 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101254454 102590683 107813963 107803171 100794941 100500300 103871530 7474207 7467494 11441450 107928441 121221028 111213644 106369209 102630095 4333624 100284745 123090583 123095623 123087348 123446939 8056764 100842491 5725708
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