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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254742   pentatricopeptide repeat-containing protein At2g17140 
 sly-r.6   101254742   pentatricopeptide repeat-containing protein At2g17140 
 sot-r.1   102587718   pentatricopeptide repeat-containing protein At2g17140 
 nta-r.1   107826937   uncharacterized LOC107826937 
 nta-r.1   107785551   uncharacterized LOC107785551 
 ath-u.5   AT2G17140   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100803535   pentatricopeptide repeat-containing protein At2g17140 
 bra-r.6   103845989   pentatricopeptide repeat-containing protein At2g17140 
 vvi-u.5   100262264   pentatricopeptide repeat-containing protein At2g17140 
 mtr-u.5   11423830   pentatricopeptide repeat-containing protein At2g17140 
 ghi-r.1   107922858   pentatricopeptide repeat-containing protein At2g17140 
 ghi-r.1   107898529   pentatricopeptide repeat-containing protein At2g17140 
 bna-r.1   106368873   pentatricopeptide repeat-containing protein At2g17140 
 bna-r.1   106371118   pentatricopeptide repeat-containing protein At2g17140 
 cit-r.1   102615837   pentatricopeptide repeat-containing protein At2g17140 
 osa-u.5   4328201   pentatricopeptide repeat-containing protein At2g17140 
 zma-u.5   103654960   pentatricopeptide repeat-containing protein At2g17140 
 tae-r.2   123142442   pentatricopeptide repeat-containing protein At2g17140-like 
 tae-r.2   123136088   pentatricopeptide repeat-containing protein At2g17140 
 tae-r.2   123132061   pentatricopeptide repeat-containing protein At2g17140-like 
 hvu-r.1   123403561   pentatricopeptide repeat-containing protein At2g17140-like 
 sbi-r.1   8069928   pentatricopeptide repeat-containing protein At2g17140 
 bdi-r.1   100834618   pentatricopeptide repeat-containing protein At2g17140 

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Top 50 coexpressed genes to 101254742 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254742 (sly-u.5 coexpression data)

CoexMap"101254742"


slyLOC101254742 | Entrez gene ID : 101254742    
Species sly sot nta ath gma bra vvi mtr ghi bna cit osa zma tae hvu sbi bdi cre ppo
Paralog 2 1 2 1 1 1 1 1 2 2 1 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_069149365.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto_mito 3  (predict for XP_069149365.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_069149365.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254742
sly-r.6
for
101254742
sot-r.1
for
102587718
nta-r.1
for
107826937
nta-r.1
for
107785551
ath-u.5
for
AT2G17140
gma-u.5
for
100803535
bra-r.6
for
103845989
vvi-u.5
for
100262264
mtr-u.5
for
11423830
ghi-r.1
for
107922858
ghi-r.1
for
107898529
bna-r.1
for
106368873
bna-r.1
for
106371118
cit-r.1
for
102615837
osa-u.5
for
4328201
zma-u.5
for
103654960
tae-r.2
for
123142442
tae-r.2
for
123136088
tae-r.2
for
123132061
hvu-r.1
for
123403561
sbi-r.1
for
8069928
bdi-r.1
for
100834618


Ortholog ID: 10655
Species sly sot nta nta ath gma bra vvi mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101254742 LOC102587718 LOC107826937 LOC107785551 AT2G17140 LOC100803535 LOC103845989 LOC100262264 LOC11423830 LOC107922858 LOC107898529 LOC106368873 LOC106371118 LOC102615837 LOC4328201 LOC103654960 LOC123142442 LOC123136088 LOC123132061 LOC123403561 LOC8069928 LOC100834618
Function* pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 uncharacterized LOC107826937 uncharacterized LOC107785551 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140-like pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140-like pentatricopeptide repeat-containing protein At2g17140-like pentatricopeptide repeat-containing protein At2g17140 pentatricopeptide repeat-containing protein At2g17140
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03018 RNA degradation 3
tae03440 Homologous recombination 3
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
tae04136 Autophagy - other 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101254742 102587718 107826937 107785551 816219 100803535 103845989 100262264 11423830 107922858 107898529 106368873 106371118 102615837 4328201 103654960 123142442 123136088 123132061 123403561 8069928 100834618
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