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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255367   probable prolyl 4-hydroxylase 12 
 sly-r.6   101255367   probable prolyl 4-hydroxylase 12 
 ath-u.5   AT4G25600   Oxoglutarate/iron-dependent oxygenase 
 gma-u.5   100795761   probable prolyl 4-hydroxylase 12 
 gma-u.5   100775928   probable prolyl 4-hydroxylase 12 
 vvi-u.5   100254198   probable prolyl 4-hydroxylase 12 
 ppo-u.5   7482077   probable prolyl 4-hydroxylase 12 
 mtr-u.5   25496532   probable prolyl 4-hydroxylase 12 

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Top 50 coexpressed genes to 101255367 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255367 (sly-u.5 coexpression data)

CoexMap"101255367"


slyLOC101255367 | Entrez gene ID : 101255367      
Species sly ath gma vvi ppo mtr cre ghi cit hvu bdi sot bra sbi osa tae nta zma bna
Paralog 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00330 [list] [network] Arginine and proline metabolism (64 genes)
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (12 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (509 genes)  IEA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (12 genes)  IEA  
GO:0031418 [list] [network] L-ascorbic acid binding  (16 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (371 genes)  IEA  
Protein XP_004234409.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  chlo 1,  cyto 1  (predict for XP_004234409.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_004234409.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255367

.
sly-r.6
for
101255367

.
ath-u.5
for
AT4G25600

.
gma-u.5
for
100795761

.
gma-u.5
for
100775928

.
vvi-u.5
for
100254198

.
ppo-u.5
for
7482077

.
mtr-u.5
for
25496532

.


Ortholog ID: 12670
Species ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol AT4G25600 LOC100795761 LOC100775928 LOC101255367 LOC103861577 LOC100254198 LOC7482077 LOC25496532 LOC107890747 LOC107930287 LOC106407509 LOC106440852 LOC102604428 LOC102618871 LOC107792403 LOC107793584
Function* Oxoglutarate/iron-dependent oxygenase probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 probable prolyl 4-hydroxylase 12 putative prolyl 4-hydroxylase 12 putative prolyl 4-hydroxylase 12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04517 IgSF CAM signaling 3
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
vvi00020 Citrate cycle (TCA cycle) 2
vvi00620 Pyruvate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00770 Pantothenate and CoA biosynthesis 2
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00330 Arginine and proline metabolism 2
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04120 Ubiquitin mediated proteolysis 3
nta00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828665 100795761 100775928 101255367 103861577 100254198 7482077 25496532 107890747 107930287 106407509 106440852 102604428 102618871 107792403 107793584
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