ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101255503	uncharacterized LOC101255503
sly-r.6	101255503	uncharacterized LOC101255503
sly-u.5	101266563	uncharacterized LOC101266563
sot-r.1	102581660	dCTP pyrophosphatase 1-like
sot-r.1	102589138	dCTP pyrophosphatase 1-like
sot-r.1	102583324	dCTP pyrophosphatase 1-like
nta-r.1	142168659	uncharacterized LOC142168659
nta-r.1	107819551	uncharacterized LOC107819551
nta-r.1	107765557	uncharacterized LOC107765557
ath-u.5	AT3G25400	dCTP pyrophosphatase-like protein
gma-u.5	100500214	uncharacterized LOC100500214
gma-u.5	100306684	uncharacterized LOC100306684
bra-r.6	103828559	dCTP pyrophosphatase 1
vvi-u.5	100241572	uncharacterized LOC100241572
vvi-u.5	100266931	uncharacterized LOC100266931
ppo-u.5	7468483	uncharacterized LOC7468483
ppo-u.5	7488587	uncharacterized LOC7488587
ppo-u.5	7459513	uncharacterized LOC7459513
mtr-u.5	11431912	dCTP pyrophosphatase 1
ghi-r.1	107927354	dCTP pyrophosphatase 1
ghi-r.1	107923131	dCTP pyrophosphatase 1
ghi-r.1	107934822	dCTP pyrophosphatase 1
bna-r.1	111213284	dCTP pyrophosphatase 1-like
bna-r.1	106405862	dCTP pyrophosphatase 1-like
cit-r.1	102624370	uncharacterized LOC102624370
cit-r.1	102620578	uncharacterized LOC102620578
osa-u.5	4329363	uncharacterized LOC4329363
osa-u.5	4335533	uncharacterized LOC4335533
osa-u.5	4336398	uncharacterized LOC4336398
zma-u.5	100282064	RS21-C6 protein
zma-u.5	100281061	mazG nucleotide pyrophosphohydrolase domain protein
tae-r.2	123041311	dCTP pyrophosphatase 1
tae-r.2	123049667	dCTP pyrophosphatase 1
tae-r.2	123041697	dCTP pyrophosphatase 1
hvu-r.1	123430171	dCTP pyrophosphatase 1-like
hvu-r.1	123430532	dCTP pyrophosphatase 1-like
sbi-r.1	8054275	dCTP pyrophosphatase 1
sbi-r.1	8084526	dCTP pyrophosphatase 1
bdi-r.1	100839966	dCTP pyrophosphatase 1
bdi-r.1	100840842	dCTP pyrophosphatase 1
cre-r.1	CHLRE_16g686552v5	uncharacterized protein

Top 50 coexpressed genes to 101255503 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101255503 (sly-u.5 coexpression data)

CoexMap"101255503"

[Cytoscape]

Annotation

functional annotation

KEGG

sly00240 [list] [network] Pyrimidine metabolism (66 genes)

sly01232 [list] [network] Nucleotide metabolism (84 genes)

GO BP

GO:0009143 [list] [network] nucleoside triphosphate catabolic process

(10 genes)

IEA

GO CC

GO MF

GO:0047429 [list] [network] nucleoside triphosphate diphosphatase activity

(10 genes)

IEA

Protein

XP_004242430.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, cyto_E.R. 3, mito 2, chlo 1

(predict for XP_004242430.1)

Subcellular
localization
TargetP

other 9

(predict for XP_004242430.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101255503	sly-r.6 for 101255503	sly-u.5 for 101266563	sot-r.1 for 102581660	sot-r.1 for 102589138	sot-r.1 for 102583324	nta-r.1 for 142168659	nta-r.1 for 107819551	nta-r.1 for 107765557	ath-u.5 for AT3G25400	gma-u.5 for 100500214	gma-u.5 for 100306684	bra-r.6 for 103828559	vvi-u.5 for 100241572	vvi-u.5 for 100266931	ppo-u.5 for 7468483	ppo-u.5 for 7488587	ppo-u.5 for 7459513	mtr-u.5 for 11431912	ghi-r.1 for 107927354	ghi-r.1 for 107923131	ghi-r.1 for 107934822	bna-r.1 for 111213284	bna-r.1 for 106405862	cit-r.1 for 102624370	cit-r.1 for 102620578	osa-u.5 for 4329363	osa-u.5 for 4335533	osa-u.5 for 4336398	zma-u.5 for 100282064	zma-u.5 for 100281061	tae-r.2 for 123041311	tae-r.2 for 123049667	tae-r.2 for 123041697	hvu-r.1 for 123430171	hvu-r.1 for 123430532	sbi-r.1 for 8054275	sbi-r.1 for 8084526	bdi-r.1 for 100839966	bdi-r.1 for 100840842	cre-r.1 for CHLRE_16g686552v5

Ortholog

Ortholog ID: 1863

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC101255503

uncharacterized LOC101266563

dCTP pyrophosphatase 1-like

uncharacterized LOC107819551

uncharacterized LOC107792941

uncharacterized LOC107804932

dCTP pyrophosphatase-like protein

nucleoside triphosphate pyrophosphohydrolase-like

dCTP pyrophosphatase 1

uncharacterized LOC100241572

uncharacterized LOC100247693

uncharacterized LOC7488587

uncharacterized LOC7459513

uncharacterized LOC7473465

dCTP pyrophosphatase 1

dCTP pyrophosphatase 1-like

uncharacterized LOC102624370

uncharacterized LOC102620578

uncharacterized LOC4329363

uncharacterized LOC4335533

uncharacterized LOC4336398

RS21-C6 protein

mazG nucleotide pyrophosphohydrolase domain protein

dCTP pyrophosphatase 1

dCTP pyrophosphatase 1-like

dCTP pyrophosphatase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00020	Citrate cycle (TCA cycle)	3
sot00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	3
nta01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	5
nta04075	Plant hormone signal transduction	5
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra03040	Spliceosome	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00240	Pyrimidine metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	3
ppo00030	Pentose phosphate pathway	2
ppo01200	Carbon metabolism	2
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00220	Arginine biosynthesis	2
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo00910	Nitrogen metabolism	2
ppo01200	Carbon metabolism	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr03040	Spliceosome	5
mtr03420	Nucleotide excision repair	3
mtr03020	RNA polymerase	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna00750	Vitamin B6 metabolism	2
bna01240	Biosynthesis of cofactors	2
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00240	Pyrimidine metabolism	2
cit01232	Nucleotide metabolism	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	3
osa00513	Various types of N-glycan biosynthesis	3
osa04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	3
osa00030	Pentose phosphate pathway	2
osa00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00240	Pyrimidine metabolism	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00999	Biosynthesis of various plant secondary metabolites	2
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00071	Fatty acid degradation	2
sbi00350	Tyrosine metabolism	2
sbi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	5

Expression

Expression pattern

Entrez Gene ID^*

101255503

101266563

102581660

102583324

102593064

107819551

107792941

107804932

822124

100500294

103828559

100241572

100247693

7488587

7459513

7473465

11431912

107927354

107953463

111213284

106405862

102624370

102620578

4329363

4335533

4336398

100282064

100281061

123041311

123185761

123053065

123430171

123430532

8054275

8084526

100839966

100840842

66056769

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	3	1	2	1	2	3	1	3	2	2	3	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101255503 (sly-u.5 coexpression data)

Top 50 enrichment test to 101255503 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**